Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG39753 | Sorghum | cytosol | 67.15 | 65.71 |
| TraesCS4B01G220300.2 | Wheat | nucleus | 50.51 | 50.73 |
| Os03t0255400-01 | Rice | nucleus | 51.39 | 50.43 |
| TraesCS4A01G083800.1 | Wheat | nucleus | 50.37 | 49.86 |
| TraesCS4D01G220600.2 | Wheat | cytosol, nucleus | 50.51 | 49.22 |
| HORVU4Hr1G062460.2 | Barley | nucleus | 45.84 | 46.8 |
| VIT_05s0102g00410.t01 | Wine grape | cytosol | 8.03 | 28.5 |
| VIT_05s0102g00400.t01 | Wine grape | nucleus | 10.07 | 27.94 |
| KRH23208 | Soybean | nucleus | 9.93 | 26.56 |
| KRH10133 | Soybean | nucleus | 10.37 | 26.01 |
| VIT_05s0102g00440.t01 | Wine grape | cytosol | 8.76 | 24.39 |
| VIT_00s0174g00140.t01 | Wine grape | cytosol | 8.91 | 24.21 |
| GSMUA_Achr2P10090_001 | Banana | nucleus | 9.78 | 11.02 |
Protein Annotations
| EnsemblPlants:Zm00001d028472_P001 | EnsemblPlants:Zm00001d028472_T001 | EnsemblPlantsGene:Zm00001d028472 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:FAR1_DNA_bnd_dom | InterPro:FHY3/FAR1 | PANTHER:PTHR31669 |
| PANTHER:PTHR31669:SF79 | PFAM:PF03101 | ProteinID:ONL96125.1 | SEG:seg | UniParc:UPI000842AC91 | UniProt:A0A1D6JWH8 |
| MapMan:15.5.46 | : | : | : | : | : |
Description
FAR1-like-transcription factor 1Far-red impaired responsive (FAR1) family protein
Coordinates
chr1:-:35965499..35970651
Molecular Weight (calculated)
75528.7 Da
IEP (calculated)
7.413
GRAVY (calculated)
-0.457
Length
685 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGTVIRIAS ESKRGNEQTD SLTEVPRAIG TLVTHNREVE NLIVLEDDTE LTPYEGMEFE SEDAARDFYS TYARSAGFRI RISRYTRSRR DNSVISRRIV
101: CSKEGFHETR ACDGLHPEQK QQERAGTRVG CKAMILIKKF SPGKWVVTKF IKNHNHGPVP PRKLDSRLVD QDCDPMEKPH SIEVDPVEEP FEGMEFESEE
201: AAKLFYVNYA RLNGFRARIS RYCRSRRDNS IISRQIVCSK EGFREVRTKK VLTDEGKTKR PRMITRVGCK AMIVVKKMNS GKWMVSKFEK EHNHSLSYSK
301: MVPSTSNITS GEIVDLAAKG AHPSEVKNEG YSAGTQCNPA DSLTILYNNL CQEAIKFAKE GSVTEEIYHV AVSALKEAAE KVAEVKRSRP TLSHCGFVRE
401: SKHDVLQEKS MSALQCSNQV ELTRTSPGSR PLQDSASNLL LIPTDILTDS RLYSGVDTAP LTGGFPTNES ESTHASESSF MHFKNTKKTS SEKSQHFLVF
501: HFGPEDAYLL LEPQNTCFNQ LIHGKEQGIH GSSKDTMVAI PAIPLALCMP VTQSLPGSST EGPYRLLAAP IEAVPISYCP AEPIRQTQKG ICALGPFGGV
601: LSELKNQGTV PKSIVHATAL ACGARAVPLE DAASLISAIE SKIRSGGAII AKLPSNNLAP LVPPAIAMSS SSEDDEEHDH SEPSQ
101: CSKEGFHETR ACDGLHPEQK QQERAGTRVG CKAMILIKKF SPGKWVVTKF IKNHNHGPVP PRKLDSRLVD QDCDPMEKPH SIEVDPVEEP FEGMEFESEE
201: AAKLFYVNYA RLNGFRARIS RYCRSRRDNS IISRQIVCSK EGFREVRTKK VLTDEGKTKR PRMITRVGCK AMIVVKKMNS GKWMVSKFEK EHNHSLSYSK
301: MVPSTSNITS GEIVDLAAKG AHPSEVKNEG YSAGTQCNPA DSLTILYNNL CQEAIKFAKE GSVTEEIYHV AVSALKEAAE KVAEVKRSRP TLSHCGFVRE
401: SKHDVLQEKS MSALQCSNQV ELTRTSPGSR PLQDSASNLL LIPTDILTDS RLYSGVDTAP LTGGFPTNES ESTHASESSF MHFKNTKKTS SEKSQHFLVF
501: HFGPEDAYLL LEPQNTCFNQ LIHGKEQGIH GSSKDTMVAI PAIPLALCMP VTQSLPGSST EGPYRLLAAP IEAVPISYCP AEPIRQTQKG ICALGPFGGV
601: LSELKNQGTV PKSIVHATAL ACGARAVPLE DAASLISAIE SKIRSGGAII AKLPSNNLAP LVPPAIAMSS SSEDDEEHDH SEPSQ
001: MVVKTYPLGM VGTNNGIAEN EGDSGLEPYV GLEFDTAEEA RDYYNSYATR TGFKVRTGQL YRSRTDGTVS SRRFVCSKEG FQLNSRTGCP AFIRVQRRDT
101: GKWVLDQIQK EHNHDLGGHI EEAQTTPRPS VQQRAPAPTK LGISVPHRPK MKVVDEADKG RSCPSGVISF KRFKGAEDSD GQTQPKATEP YAGLEFNSAN
201: EACQFYQAYA EVVGFRVRIG QLFRSKVDGS ITSRRFVCSK EGFQHPSRMG CGAYMRIKRQ DSGGWIVDRL NKDHNHDLEP GKKNAGMKKI TDDVTGGLDS
301: VDLIELNDLS NHISSTRENT IGKEWYPVLL DYFQSKQAED MGFFYAIELD SNGSCMSIFW ADSRSRFACS QFGDAVVFDT SYRKGDYSVP FATFIGFNHH
401: RQPVLLGGAL VADESKEAFS WLFQTWLRAM SGRRPRSMVA DQDLPIQQAV AQVFPGTHHR FSAWQIRSKE RENLRSFPNE FKYEYEKCLY QSQTTVEFDT
501: MWSSLVNKYG LRDNMWLREI YEKREKWVPA YLRASFFGGI HVDGTFDPFY GTSLNSLTSL REFISRYEQG LEQRREEERK EDFNSYNLQP FLQTKEPVEE
601: QCRRLYTLTI FRIFQSELAQ SYNYLGLKTY EEGAISRFLV RKCGNENEKH AVTFSASNLN ASCSCQMFEY EGLLCRHILK VFNLLDIREL PSRYILHRWT
701: KNAEFGFVRD VESGVTSQDL KALMIWSLRE AASKYIEFGT SSLEKYKLAY EIMREGGKKL CWQR
101: GKWVLDQIQK EHNHDLGGHI EEAQTTPRPS VQQRAPAPTK LGISVPHRPK MKVVDEADKG RSCPSGVISF KRFKGAEDSD GQTQPKATEP YAGLEFNSAN
201: EACQFYQAYA EVVGFRVRIG QLFRSKVDGS ITSRRFVCSK EGFQHPSRMG CGAYMRIKRQ DSGGWIVDRL NKDHNHDLEP GKKNAGMKKI TDDVTGGLDS
301: VDLIELNDLS NHISSTRENT IGKEWYPVLL DYFQSKQAED MGFFYAIELD SNGSCMSIFW ADSRSRFACS QFGDAVVFDT SYRKGDYSVP FATFIGFNHH
401: RQPVLLGGAL VADESKEAFS WLFQTWLRAM SGRRPRSMVA DQDLPIQQAV AQVFPGTHHR FSAWQIRSKE RENLRSFPNE FKYEYEKCLY QSQTTVEFDT
501: MWSSLVNKYG LRDNMWLREI YEKREKWVPA YLRASFFGGI HVDGTFDPFY GTSLNSLTSL REFISRYEQG LEQRREEERK EDFNSYNLQP FLQTKEPVEE
601: QCRRLYTLTI FRIFQSELAQ SYNYLGLKTY EEGAISRFLV RKCGNENEKH AVTFSASNLN ASCSCQMFEY EGLLCRHILK VFNLLDIREL PSRYILHRWT
701: KNAEFGFVRD VESGVTSQDL KALMIWSLRE AASKYIEFGT SSLEKYKLAY EIMREGGKKL CWQR
Arabidopsis Description
FRS7Protein FAR1-RELATED SEQUENCE 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8J3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.