Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G083800.1 | Wheat | nucleus | 94.59 | 96.1 |
| TraesCS4B01G220300.2 | Wheat | nucleus | 93.17 | 96.04 |
| HORVU4Hr1G062460.2 | Barley | nucleus | 71.12 | 74.52 |
| Os03t0255400-01 | Rice | nucleus | 60.6 | 61.03 |
| KXG39753 | Sorghum | cytosol | 54.62 | 54.86 |
| Zm00001d028472_P001 | Maize | nucleus | 49.22 | 50.51 |
| VIT_05s0102g00410.t01 | Wine grape | cytosol | 7.68 | 27.98 |
| VIT_05s0102g00400.t01 | Wine grape | nucleus | 9.82 | 27.94 |
| KRH23208 | Soybean | nucleus | 10.1 | 27.73 |
| KRH10133 | Soybean | nucleus | 10.24 | 26.37 |
| VIT_00s0174g00140.t01 | Wine grape | cytosol | 8.96 | 25.0 |
| VIT_05s0102g00440.t01 | Wine grape | cytosol | 8.11 | 23.17 |
| GSMUA_Achr2P10090_001 | Banana | nucleus | 9.1 | 10.53 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G220600.2 | EnsemblPlantsGene:TraesCS4D01G220600 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0046872 | InterPro:FAR1_DNA_bnd_dom |
| InterPro:FHY3/FAR1 | InterPro:IPR000571 | InterPro:Znf_CCCH | PANTHER:PTHR31669 | PANTHER:PTHR31669:SF79 | PFAM:PF03101 |
| PFscan:PS50103 | SEG:seg | MapMan:15.5.46 | : | : | : |
Description
No Description!
Coordinates
chr4D:-:375742193..375745618
Molecular Weight (calculated)
78039.6 Da
IEP (calculated)
6.852
GRAVY (calculated)
-0.706
Length
703 amino acids
Sequence
(BLAST)
(BLAST)
001: ESKRDNEQND DLTGLPRAFT VMEISSHEPS EAEILIGHED DTELTPCEGM EFESEDAARD FYSLYARHAG FRIRISRYTR SRRDNSIISR RIVCSKEGFH
101: ETRNCEGLHP DQKQQERTGT RVGCKAMIMI KKIDPGKWVV TKFVKTHNHG SVPPRKLDIR SAHQDLNPVE KPHSAEEDPV EEPVEGMEFD SEETAKLFYI
201: NYARLNGFRA RISRYCRSRR DNSIISRQIV CSKEGFREVR AKKEITDEGK TKRPRMITRV GCKAMIVVKK MNSGKWMVSK FEKEHNHSLL SSKQAPSTSN
301: ITSGENAEFA AKSSDPDEAK VEEYSAGIQC NSTDSLTVLY NQLCQEAIKF AKEGSVTEEI YHVAMSALKE AAEKVAQLKS CHPTMPHRGV SSSESKHKVV
401: QMKTMSASQC SDVAKQKTTP SQLTMFQEST SKLMFIPTNL LTDSGLANSD NNHPSLCAFT SSGRQCRHGS ECSYLHAENR KEDCPEKYQN STSSRATQGN
501: HSTYHGHSEE TTVAIPAIPL TLYMPLSRNS PGASADGQYK LLAAPIEAVP ISYRPAEPIR QPKRSFCNLG PLPGVMSELT RREKGPHPLV HATALACGAR
601: VVPVEEAASL IKAIESKIRS GGAKIARLPS SRLTRLVPEA VSMSSSSEDG EDNDHSEPPA VNVAGYCHDD QISEEMKLQG EASELETDSE NCSGHENHDT
701: ADC
101: ETRNCEGLHP DQKQQERTGT RVGCKAMIMI KKIDPGKWVV TKFVKTHNHG SVPPRKLDIR SAHQDLNPVE KPHSAEEDPV EEPVEGMEFD SEETAKLFYI
201: NYARLNGFRA RISRYCRSRR DNSIISRQIV CSKEGFREVR AKKEITDEGK TKRPRMITRV GCKAMIVVKK MNSGKWMVSK FEKEHNHSLL SSKQAPSTSN
301: ITSGENAEFA AKSSDPDEAK VEEYSAGIQC NSTDSLTVLY NQLCQEAIKF AKEGSVTEEI YHVAMSALKE AAEKVAQLKS CHPTMPHRGV SSSESKHKVV
401: QMKTMSASQC SDVAKQKTTP SQLTMFQEST SKLMFIPTNL LTDSGLANSD NNHPSLCAFT SSGRQCRHGS ECSYLHAENR KEDCPEKYQN STSSRATQGN
501: HSTYHGHSEE TTVAIPAIPL TLYMPLSRNS PGASADGQYK LLAAPIEAVP ISYRPAEPIR QPKRSFCNLG PLPGVMSELT RREKGPHPLV HATALACGAR
601: VVPVEEAASL IKAIESKIRS GGAKIARLPS SRLTRLVPEA VSMSSSSEDG EDNDHSEPPA VNVAGYCHDD QISEEMKLQG EASELETDSE NCSGHENHDT
701: ADC
001: MVVKTYPLGM VGTNNGIAEN EGDSGLEPYV GLEFDTAEEA RDYYNSYATR TGFKVRTGQL YRSRTDGTVS SRRFVCSKEG FQLNSRTGCP AFIRVQRRDT
101: GKWVLDQIQK EHNHDLGGHI EEAQTTPRPS VQQRAPAPTK LGISVPHRPK MKVVDEADKG RSCPSGVISF KRFKGAEDSD GQTQPKATEP YAGLEFNSAN
201: EACQFYQAYA EVVGFRVRIG QLFRSKVDGS ITSRRFVCSK EGFQHPSRMG CGAYMRIKRQ DSGGWIVDRL NKDHNHDLEP GKKNAGMKKI TDDVTGGLDS
301: VDLIELNDLS NHISSTRENT IGKEWYPVLL DYFQSKQAED MGFFYAIELD SNGSCMSIFW ADSRSRFACS QFGDAVVFDT SYRKGDYSVP FATFIGFNHH
401: RQPVLLGGAL VADESKEAFS WLFQTWLRAM SGRRPRSMVA DQDLPIQQAV AQVFPGTHHR FSAWQIRSKE RENLRSFPNE FKYEYEKCLY QSQTTVEFDT
501: MWSSLVNKYG LRDNMWLREI YEKREKWVPA YLRASFFGGI HVDGTFDPFY GTSLNSLTSL REFISRYEQG LEQRREEERK EDFNSYNLQP FLQTKEPVEE
601: QCRRLYTLTI FRIFQSELAQ SYNYLGLKTY EEGAISRFLV RKCGNENEKH AVTFSASNLN ASCSCQMFEY EGLLCRHILK VFNLLDIREL PSRYILHRWT
701: KNAEFGFVRD VESGVTSQDL KALMIWSLRE AASKYIEFGT SSLEKYKLAY EIMREGGKKL CWQR
101: GKWVLDQIQK EHNHDLGGHI EEAQTTPRPS VQQRAPAPTK LGISVPHRPK MKVVDEADKG RSCPSGVISF KRFKGAEDSD GQTQPKATEP YAGLEFNSAN
201: EACQFYQAYA EVVGFRVRIG QLFRSKVDGS ITSRRFVCSK EGFQHPSRMG CGAYMRIKRQ DSGGWIVDRL NKDHNHDLEP GKKNAGMKKI TDDVTGGLDS
301: VDLIELNDLS NHISSTRENT IGKEWYPVLL DYFQSKQAED MGFFYAIELD SNGSCMSIFW ADSRSRFACS QFGDAVVFDT SYRKGDYSVP FATFIGFNHH
401: RQPVLLGGAL VADESKEAFS WLFQTWLRAM SGRRPRSMVA DQDLPIQQAV AQVFPGTHHR FSAWQIRSKE RENLRSFPNE FKYEYEKCLY QSQTTVEFDT
501: MWSSLVNKYG LRDNMWLREI YEKREKWVPA YLRASFFGGI HVDGTFDPFY GTSLNSLTSL REFISRYEQG LEQRREEERK EDFNSYNLQP FLQTKEPVEE
601: QCRRLYTLTI FRIFQSELAQ SYNYLGLKTY EEGAISRFLV RKCGNENEKH AVTFSASNLN ASCSCQMFEY EGLLCRHILK VFNLLDIREL PSRYILHRWT
701: KNAEFGFVRD VESGVTSQDL KALMIWSLRE AASKYIEFGT SSLEKYKLAY EIMREGGKKL CWQR
Arabidopsis Description
FRS7Protein FAR1-RELATED SEQUENCE 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8J3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.