Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G220300.2 | Wheat | nucleus | 93.93 | 95.31 |
| TraesCS4D01G220600.2 | Wheat | cytosol, nucleus | 96.1 | 94.59 |
| HORVU4Hr1G062460.2 | Barley | nucleus | 71.68 | 73.92 |
| Os03t0255400-01 | Rice | nucleus | 60.84 | 60.32 |
| KXG39753 | Sorghum | cytosol | 55.2 | 54.57 |
| Zm00001d028472_P001 | Maize | nucleus | 49.86 | 50.37 |
| KRH23208 | Soybean | nucleus | 10.55 | 28.52 |
| VIT_05s0102g00410.t01 | Wine grape | cytosol | 7.8 | 27.98 |
| VIT_05s0102g00400.t01 | Wine grape | nucleus | 9.97 | 27.94 |
| KRH10133 | Soybean | nucleus | 10.69 | 27.11 |
| VIT_00s0174g00140.t01 | Wine grape | cytosol | 9.1 | 25.0 |
| VIT_05s0102g00440.t01 | Wine grape | cytosol | 8.38 | 23.58 |
| GSMUA_Achr2P10090_001 | Banana | nucleus | 9.1 | 10.36 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G083800.1 | EnsemblPlantsGene:TraesCS4A01G083800 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0046872 | InterPro:FAR1_DNA_bnd_dom |
| InterPro:FHY3/FAR1 | InterPro:IPR000571 | InterPro:Znf_CCCH | PANTHER:PTHR31669 | PANTHER:PTHR31669:SF79 | PFAM:PF03101 |
| PFscan:PS50103 | SEG:seg | MapMan:15.5.46 | : | : | : |
Description
No Description!
Coordinates
chr4A:+:88422586..88425893
Molecular Weight (calculated)
76634.2 Da
IEP (calculated)
6.827
GRAVY (calculated)
-0.643
Length
692 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGLPRAFTV MEISSHEPSE AEILIGHEDD TELTPCEGMQ FESEDAARDF YSLYARHAGF RIRISRYTRS RHDNSIISRR IVCSKEGFHE TRNCEGLHPD
101: QKQQERTGTR VGCKAMIMIK KIDPGKWVVT KFVKTHNHGS VPPRKLDIRS AHQDLNPVEK PHSTEEDSVE EPAEGMEFDS EEAAKLFYIN YARLNGFRAR
201: ISRYCRSRRD NSIISRQIVC SKEGFREVRA KKEITDEGKT KRPRMITRVG CKAMIVVKKM NSGKWMVSKF EKEHNHSLLS SKQAPSTSNI TSGENAEFAA
301: KSSDPDEVKV EEYSAGIQCN STDSLTVLYN QLCQEAIKFA KEGSVTEEIY HVAMSALKEA AEKVAQVKSC HPIMPHRGVS GSESKHKVVQ MKTMSASQCS
401: DVAKQKTTPS QLTVFQESVS KLMFIPTNLL TDSGLANSDS NHPSLCAFTS SGRQCGHGSE CSYLHAENRK EDCPEKYQNS TSSRATQGNH STYHGHSEET
501: TVAIPAIPLT LHMPLPRNSP GASADGQYKL LAAPIEAVPI SYRPAEPIRQ PKRSFCNLGP LPGVMSELTR QEKGPHPLVH ATALACGARV VPVEEAASLI
601: KAIESKIRSG GAKIARLPSS RLTRLVPEAI SMSSSSEDGE ENDHSEPPAV NVEGYCHDDQ ISEEMKLQGE ASELETDFEN CSGHENHDTA DC
101: QKQQERTGTR VGCKAMIMIK KIDPGKWVVT KFVKTHNHGS VPPRKLDIRS AHQDLNPVEK PHSTEEDSVE EPAEGMEFDS EEAAKLFYIN YARLNGFRAR
201: ISRYCRSRRD NSIISRQIVC SKEGFREVRA KKEITDEGKT KRPRMITRVG CKAMIVVKKM NSGKWMVSKF EKEHNHSLLS SKQAPSTSNI TSGENAEFAA
301: KSSDPDEVKV EEYSAGIQCN STDSLTVLYN QLCQEAIKFA KEGSVTEEIY HVAMSALKEA AEKVAQVKSC HPIMPHRGVS GSESKHKVVQ MKTMSASQCS
401: DVAKQKTTPS QLTVFQESVS KLMFIPTNLL TDSGLANSDS NHPSLCAFTS SGRQCGHGSE CSYLHAENRK EDCPEKYQNS TSSRATQGNH STYHGHSEET
501: TVAIPAIPLT LHMPLPRNSP GASADGQYKL LAAPIEAVPI SYRPAEPIRQ PKRSFCNLGP LPGVMSELTR QEKGPHPLVH ATALACGARV VPVEEAASLI
601: KAIESKIRSG GAKIARLPSS RLTRLVPEAI SMSSSSEDGE ENDHSEPPAV NVEGYCHDDQ ISEEMKLQGE ASELETDFEN CSGHENHDTA DC
001: MVVKTYPLGM VGTNNGIAEN EGDSGLEPYV GLEFDTAEEA RDYYNSYATR TGFKVRTGQL YRSRTDGTVS SRRFVCSKEG FQLNSRTGCP AFIRVQRRDT
101: GKWVLDQIQK EHNHDLGGHI EEAQTTPRPS VQQRAPAPTK LGISVPHRPK MKVVDEADKG RSCPSGVISF KRFKGAEDSD GQTQPKATEP YAGLEFNSAN
201: EACQFYQAYA EVVGFRVRIG QLFRSKVDGS ITSRRFVCSK EGFQHPSRMG CGAYMRIKRQ DSGGWIVDRL NKDHNHDLEP GKKNAGMKKI TDDVTGGLDS
301: VDLIELNDLS NHISSTRENT IGKEWYPVLL DYFQSKQAED MGFFYAIELD SNGSCMSIFW ADSRSRFACS QFGDAVVFDT SYRKGDYSVP FATFIGFNHH
401: RQPVLLGGAL VADESKEAFS WLFQTWLRAM SGRRPRSMVA DQDLPIQQAV AQVFPGTHHR FSAWQIRSKE RENLRSFPNE FKYEYEKCLY QSQTTVEFDT
501: MWSSLVNKYG LRDNMWLREI YEKREKWVPA YLRASFFGGI HVDGTFDPFY GTSLNSLTSL REFISRYEQG LEQRREEERK EDFNSYNLQP FLQTKEPVEE
601: QCRRLYTLTI FRIFQSELAQ SYNYLGLKTY EEGAISRFLV RKCGNENEKH AVTFSASNLN ASCSCQMFEY EGLLCRHILK VFNLLDIREL PSRYILHRWT
701: KNAEFGFVRD VESGVTSQDL KALMIWSLRE AASKYIEFGT SSLEKYKLAY EIMREGGKKL CWQR
101: GKWVLDQIQK EHNHDLGGHI EEAQTTPRPS VQQRAPAPTK LGISVPHRPK MKVVDEADKG RSCPSGVISF KRFKGAEDSD GQTQPKATEP YAGLEFNSAN
201: EACQFYQAYA EVVGFRVRIG QLFRSKVDGS ITSRRFVCSK EGFQHPSRMG CGAYMRIKRQ DSGGWIVDRL NKDHNHDLEP GKKNAGMKKI TDDVTGGLDS
301: VDLIELNDLS NHISSTRENT IGKEWYPVLL DYFQSKQAED MGFFYAIELD SNGSCMSIFW ADSRSRFACS QFGDAVVFDT SYRKGDYSVP FATFIGFNHH
401: RQPVLLGGAL VADESKEAFS WLFQTWLRAM SGRRPRSMVA DQDLPIQQAV AQVFPGTHHR FSAWQIRSKE RENLRSFPNE FKYEYEKCLY QSQTTVEFDT
501: MWSSLVNKYG LRDNMWLREI YEKREKWVPA YLRASFFGGI HVDGTFDPFY GTSLNSLTSL REFISRYEQG LEQRREEERK EDFNSYNLQP FLQTKEPVEE
601: QCRRLYTLTI FRIFQSELAQ SYNYLGLKTY EEGAISRFLV RKCGNENEKH AVTFSASNLN ASCSCQMFEY EGLLCRHILK VFNLLDIREL PSRYILHRWT
701: KNAEFGFVRD VESGVTSQDL KALMIWSLRE AASKYIEFGT SSLEKYKLAY EIMREGGKKL CWQR
Arabidopsis Description
FRS7Protein FAR1-RELATED SEQUENCE 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8J3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.