Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d028472_P001 | Maize | nucleus | 65.71 | 67.15 |
| TraesCS4B01G220300.2 | Wheat | nucleus | 54.29 | 55.72 |
| TraesCS4A01G083800.1 | Wheat | nucleus | 54.57 | 55.2 |
| Os03t0255400-01 | Rice | nucleus | 54.71 | 54.87 |
| TraesCS4D01G220600.2 | Wheat | cytosol, nucleus | 54.86 | 54.62 |
| HORVU4Hr1G062460.2 | Barley | nucleus | 48.0 | 50.07 |
| VIT_05s0102g00410.t01 | Wine grape | cytosol | 8.14 | 29.53 |
| VIT_05s0102g00400.t01 | Wine grape | nucleus | 9.86 | 27.94 |
| KRH23208 | Soybean | nucleus | 9.43 | 25.78 |
| VIT_00s0174g00140.t01 | Wine grape | cytosol | 9.0 | 25.0 |
| VIT_05s0102g00440.t01 | Wine grape | cytosol | 8.71 | 24.8 |
| KRH10133 | Soybean | nucleus | 9.43 | 24.18 |
| GSMUA_Achr2P10090_001 | Banana | nucleus | 8.86 | 10.2 |
Protein Annotations
| EnsemblPlants:KXG39753 | EnsemblPlantsGene:SORBI_3001G433000 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:FAR1_DNA_bnd_dom | InterPro:FHY3/FAR1 | PANTHER:PTHR31669 | PANTHER:PTHR31669:SF79 |
| PFAM:PF03101 | ProteinID:KXG39753 | ProteinID:KXG39753.1 | SEG:seg | UniParc:UPI00081AD959 | UniProt:A0A1B6QPB6 |
| MapMan:15.5.46 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:-:71159379..71162200
Molecular Weight (calculated)
76896.1 Da
IEP (calculated)
6.985
GRAVY (calculated)
-0.514
Length
700 amino acids
Sequence
(BLAST)
(BLAST)
001: MVVMEGTAIG TAIESKPGNE QKDSLTEVLR TTETLVARDC EVEKLIGLED DTELTPYEGM EFESEDAARD FYSTYARSAG FRIRISRYTR SRRDNSVISR
101: RIVCSKEGFH ETRACDGLHS EQKQKERAGT RVGCKAMILI KKFDPGKWMV TKFVKNHNHG PVPPRRLDSR PADQDCDQIE KPHSIEADPV QEPFEGMEFE
201: SEEAAKFFYV NYARLTGFRA RISRYCRSRR DNSIISRQIV CSKEGFRELR TKKVMTDEGK TKRPRMITRV GCKAMIVVKK MNSGKWMVSK FEKEHNHSLS
301: HSKMIPGTSN ITSREVADFA AKSADPNEVK NEGFGAGTQC NPADSLTVLY NNLCQEAIKF AKEGSVTEEI YHVAVSALKE AAEKVAEVKR SRPTLPHCGF
401: ISESKHDVLQ LKTTSALQCS NQVELTTTSP SPGSRPAQDP ASNLLLIPTK ILTDSGLYDG VDTVVPLSRG FPKNGRQGTH TSESSVMHFE TTKTSSQKSQ
501: NTCSNKLIHG KEQVIHGSSE DSMVAIPAIP LALCMPVTQN LPGSSAEVPY RLLAAPIQAV PISYCPAEPI RQPQKGICAL SPFGGVLSEL NNHGTGPKSL
601: VHATALACGA RVVPLEEAAS LINAIESKIR SGGAIIAKVP SSNLTSPVPP SIAMSSSSED EEHDPSEPLM VDIDRNFNQQ SSDEMKLQSE PSESETEADN
101: RIVCSKEGFH ETRACDGLHS EQKQKERAGT RVGCKAMILI KKFDPGKWMV TKFVKNHNHG PVPPRRLDSR PADQDCDQIE KPHSIEADPV QEPFEGMEFE
201: SEEAAKFFYV NYARLTGFRA RISRYCRSRR DNSIISRQIV CSKEGFRELR TKKVMTDEGK TKRPRMITRV GCKAMIVVKK MNSGKWMVSK FEKEHNHSLS
301: HSKMIPGTSN ITSREVADFA AKSADPNEVK NEGFGAGTQC NPADSLTVLY NNLCQEAIKF AKEGSVTEEI YHVAVSALKE AAEKVAEVKR SRPTLPHCGF
401: ISESKHDVLQ LKTTSALQCS NQVELTTTSP SPGSRPAQDP ASNLLLIPTK ILTDSGLYDG VDTVVPLSRG FPKNGRQGTH TSESSVMHFE TTKTSSQKSQ
501: NTCSNKLIHG KEQVIHGSSE DSMVAIPAIP LALCMPVTQN LPGSSAEVPY RLLAAPIQAV PISYCPAEPI RQPQKGICAL SPFGGVLSEL NNHGTGPKSL
601: VHATALACGA RVVPLEEAAS LINAIESKIR SGGAIIAKVP SSNLTSPVPP SIAMSSSSED EEHDPSEPLM VDIDRNFNQQ SSDEMKLQSE PSESETEADN
001: MVVKTYPLGM VGTNNGIAEN EGDSGLEPYV GLEFDTAEEA RDYYNSYATR TGFKVRTGQL YRSRTDGTVS SRRFVCSKEG FQLNSRTGCP AFIRVQRRDT
101: GKWVLDQIQK EHNHDLGGHI EEAQTTPRPS VQQRAPAPTK LGISVPHRPK MKVVDEADKG RSCPSGVISF KRFKGAEDSD GQTQPKATEP YAGLEFNSAN
201: EACQFYQAYA EVVGFRVRIG QLFRSKVDGS ITSRRFVCSK EGFQHPSRMG CGAYMRIKRQ DSGGWIVDRL NKDHNHDLEP GKKNAGMKKI TDDVTGGLDS
301: VDLIELNDLS NHISSTRENT IGKEWYPVLL DYFQSKQAED MGFFYAIELD SNGSCMSIFW ADSRSRFACS QFGDAVVFDT SYRKGDYSVP FATFIGFNHH
401: RQPVLLGGAL VADESKEAFS WLFQTWLRAM SGRRPRSMVA DQDLPIQQAV AQVFPGTHHR FSAWQIRSKE RENLRSFPNE FKYEYEKCLY QSQTTVEFDT
501: MWSSLVNKYG LRDNMWLREI YEKREKWVPA YLRASFFGGI HVDGTFDPFY GTSLNSLTSL REFISRYEQG LEQRREEERK EDFNSYNLQP FLQTKEPVEE
601: QCRRLYTLTI FRIFQSELAQ SYNYLGLKTY EEGAISRFLV RKCGNENEKH AVTFSASNLN ASCSCQMFEY EGLLCRHILK VFNLLDIREL PSRYILHRWT
701: KNAEFGFVRD VESGVTSQDL KALMIWSLRE AASKYIEFGT SSLEKYKLAY EIMREGGKKL CWQR
101: GKWVLDQIQK EHNHDLGGHI EEAQTTPRPS VQQRAPAPTK LGISVPHRPK MKVVDEADKG RSCPSGVISF KRFKGAEDSD GQTQPKATEP YAGLEFNSAN
201: EACQFYQAYA EVVGFRVRIG QLFRSKVDGS ITSRRFVCSK EGFQHPSRMG CGAYMRIKRQ DSGGWIVDRL NKDHNHDLEP GKKNAGMKKI TDDVTGGLDS
301: VDLIELNDLS NHISSTRENT IGKEWYPVLL DYFQSKQAED MGFFYAIELD SNGSCMSIFW ADSRSRFACS QFGDAVVFDT SYRKGDYSVP FATFIGFNHH
401: RQPVLLGGAL VADESKEAFS WLFQTWLRAM SGRRPRSMVA DQDLPIQQAV AQVFPGTHHR FSAWQIRSKE RENLRSFPNE FKYEYEKCLY QSQTTVEFDT
501: MWSSLVNKYG LRDNMWLREI YEKREKWVPA YLRASFFGGI HVDGTFDPFY GTSLNSLTSL REFISRYEQG LEQRREEERK EDFNSYNLQP FLQTKEPVEE
601: QCRRLYTLTI FRIFQSELAQ SYNYLGLKTY EEGAISRFLV RKCGNENEKH AVTFSASNLN ASCSCQMFEY EGLLCRHILK VFNLLDIREL PSRYILHRWT
701: KNAEFGFVRD VESGVTSQDL KALMIWSLRE AASKYIEFGT SSLEKYKLAY EIMREGGKKL CWQR
Arabidopsis Description
FRS7Protein FAR1-RELATED SEQUENCE 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8J3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.