Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G220300.2 | Wheat | nucleus | 75.26 | 74.05 |
| TraesCS4A01G083800.1 | Wheat | nucleus | 73.92 | 71.68 |
| TraesCS4D01G220600.2 | Wheat | cytosol, nucleus | 74.52 | 71.12 |
| Os03t0255400-01 | Rice | nucleus | 58.87 | 56.59 |
| KXG39753 | Sorghum | cytosol | 50.07 | 48.0 |
| Zm00001d028472_P001 | Maize | nucleus | 46.8 | 45.84 |
| VIT_05s0102g00410.t01 | Wine grape | cytosol | 7.9 | 27.46 |
| KRH23208 | Soybean | nucleus | 10.28 | 26.95 |
| VIT_05s0102g00400.t01 | Wine grape | nucleus | 9.84 | 26.72 |
| KRH10133 | Soybean | nucleus | 10.43 | 25.64 |
| VIT_00s0174g00140.t01 | Wine grape | cytosol | 9.54 | 25.4 |
| VIT_05s0102g00440.t01 | Wine grape | cytosol | 9.24 | 25.2 |
| GSMUA_Achr2P10090_001 | Banana | nucleus | 9.54 | 10.53 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G062460.2 | EnsemblPlantsGene:HORVU4Hr1G062460 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:FAR1_DNA_bnd_dom | InterPro:FHY3/FAR1 | PANTHER:PTHR31669 | PANTHER:PTHR31669:SF79 |
| PFAM:PF03101 | SEG:seg | UniParc:UPI000B48447F | UniProt:A0A287PBI9 | MapMan:15.5.46 | : |
Description
No Description!
Coordinates
chrchr4H:-:522902359..522908488
Molecular Weight (calculated)
73739.6 Da
IEP (calculated)
7.049
GRAVY (calculated)
-0.665
Length
671 amino acids
Sequence
(BLAST)
(BLAST)
001: MEISSHEPSE AENLIGHEDD TELTPCEGME FESEDAARDF YSLYARHAGF RIRISRYTRS RRDNSIISRR IVCSKEGFHE TRNCEGLHPD QKQQERTGTR
101: VGCKAMIMIK KIGPGKWVVA KFVKTHNHGS VPPRKLDIRS AHQDLNPIEK PQSTEVDPVG EPVEGMEFDS EEAAKLFYIN YARLNGFRAR ISRYCRSRRD
201: NSIISRQIVC SKEGFREVRA KKEVTDEGKT KRPRMITRVG CKAMIVVKKM NSGKWMVSKF EKEHNHLLSS SKLAPSTSNI TSGDNAEFSA KSSAPNEAEV
301: EGHTTDSLTV LYNHLCQEAI KFAKEGSVTE EIYHVAMSAL KEASEKVSQV KSCSQHGVSG SEGKHKVVQM KTMSASQCSD EARQKITPSR LTMFQESTSN
401: LVLIPANLLT DSGLSNSDNN RPLSCAFPAS GGQGRHGPEC SYLHAKNRKV DSPEKYQNST SGRATQGNHA TYHGPSEETS VAIPAIPLTL YMPVSRNSPG
501: DSADGQYKLL TAPIEAVPIS YRPAEPIRQP KRSFCNLGPL PGVMSELTGR EKGPHPLVHA TALACGARVV PLEEAASLIK AIESKIRSGG AKIARLPSSS
601: LSRLVPEAVS MSSSSEDGEE NDHSEPPAVN VEGYGHDDQI SEEMKLQGEA SELETDSENC SGHENHDTAD C
101: VGCKAMIMIK KIGPGKWVVA KFVKTHNHGS VPPRKLDIRS AHQDLNPIEK PQSTEVDPVG EPVEGMEFDS EEAAKLFYIN YARLNGFRAR ISRYCRSRRD
201: NSIISRQIVC SKEGFREVRA KKEVTDEGKT KRPRMITRVG CKAMIVVKKM NSGKWMVSKF EKEHNHLLSS SKLAPSTSNI TSGDNAEFSA KSSAPNEAEV
301: EGHTTDSLTV LYNHLCQEAI KFAKEGSVTE EIYHVAMSAL KEASEKVSQV KSCSQHGVSG SEGKHKVVQM KTMSASQCSD EARQKITPSR LTMFQESTSN
401: LVLIPANLLT DSGLSNSDNN RPLSCAFPAS GGQGRHGPEC SYLHAKNRKV DSPEKYQNST SGRATQGNHA TYHGPSEETS VAIPAIPLTL YMPVSRNSPG
501: DSADGQYKLL TAPIEAVPIS YRPAEPIRQP KRSFCNLGPL PGVMSELTGR EKGPHPLVHA TALACGARVV PLEEAASLIK AIESKIRSGG AKIARLPSSS
601: LSRLVPEAVS MSSSSEDGEE NDHSEPPAVN VEGYGHDDQI SEEMKLQGEA SELETDSENC SGHENHDTAD C
001: MVVKTYPLGM VGTNNGIAEN EGDSGLEPYV GLEFDTAEEA RDYYNSYATR TGFKVRTGQL YRSRTDGTVS SRRFVCSKEG FQLNSRTGCP AFIRVQRRDT
101: GKWVLDQIQK EHNHDLGGHI EEAQTTPRPS VQQRAPAPTK LGISVPHRPK MKVVDEADKG RSCPSGVISF KRFKGAEDSD GQTQPKATEP YAGLEFNSAN
201: EACQFYQAYA EVVGFRVRIG QLFRSKVDGS ITSRRFVCSK EGFQHPSRMG CGAYMRIKRQ DSGGWIVDRL NKDHNHDLEP GKKNAGMKKI TDDVTGGLDS
301: VDLIELNDLS NHISSTRENT IGKEWYPVLL DYFQSKQAED MGFFYAIELD SNGSCMSIFW ADSRSRFACS QFGDAVVFDT SYRKGDYSVP FATFIGFNHH
401: RQPVLLGGAL VADESKEAFS WLFQTWLRAM SGRRPRSMVA DQDLPIQQAV AQVFPGTHHR FSAWQIRSKE RENLRSFPNE FKYEYEKCLY QSQTTVEFDT
501: MWSSLVNKYG LRDNMWLREI YEKREKWVPA YLRASFFGGI HVDGTFDPFY GTSLNSLTSL REFISRYEQG LEQRREEERK EDFNSYNLQP FLQTKEPVEE
601: QCRRLYTLTI FRIFQSELAQ SYNYLGLKTY EEGAISRFLV RKCGNENEKH AVTFSASNLN ASCSCQMFEY EGLLCRHILK VFNLLDIREL PSRYILHRWT
701: KNAEFGFVRD VESGVTSQDL KALMIWSLRE AASKYIEFGT SSLEKYKLAY EIMREGGKKL CWQR
101: GKWVLDQIQK EHNHDLGGHI EEAQTTPRPS VQQRAPAPTK LGISVPHRPK MKVVDEADKG RSCPSGVISF KRFKGAEDSD GQTQPKATEP YAGLEFNSAN
201: EACQFYQAYA EVVGFRVRIG QLFRSKVDGS ITSRRFVCSK EGFQHPSRMG CGAYMRIKRQ DSGGWIVDRL NKDHNHDLEP GKKNAGMKKI TDDVTGGLDS
301: VDLIELNDLS NHISSTRENT IGKEWYPVLL DYFQSKQAED MGFFYAIELD SNGSCMSIFW ADSRSRFACS QFGDAVVFDT SYRKGDYSVP FATFIGFNHH
401: RQPVLLGGAL VADESKEAFS WLFQTWLRAM SGRRPRSMVA DQDLPIQQAV AQVFPGTHHR FSAWQIRSKE RENLRSFPNE FKYEYEKCLY QSQTTVEFDT
501: MWSSLVNKYG LRDNMWLREI YEKREKWVPA YLRASFFGGI HVDGTFDPFY GTSLNSLTSL REFISRYEQG LEQRREEERK EDFNSYNLQP FLQTKEPVEE
601: QCRRLYTLTI FRIFQSELAQ SYNYLGLKTY EEGAISRFLV RKCGNENEKH AVTFSASNLN ASCSCQMFEY EGLLCRHILK VFNLLDIREL PSRYILHRWT
701: KNAEFGFVRD VESGVTSQDL KALMIWSLRE AASKYIEFGT SSLEKYKLAY EIMREGGKKL CWQR
Arabidopsis Description
FRS7Protein FAR1-RELATED SEQUENCE 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8J3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.