CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

mitochondrion 3
plastid 6
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH39044

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G14760.1	KRH39044	AT3G17860.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g014530.1.1	Tomato	plastid	71.1	76.03
VIT_14s0066g01240.t01	Wine grape	cytosol, plastid	77.43	75.34
Solyc01g056580.2.1	Tomato	cytosol	43.89	73.58
PGSC0003DMT400033442	Potato	mitochondrion	72.18	72.4
GSMUA_Achr10P...	Banana	plastid	64.76	70.07
Bra008739.1-P	Field mustard	cytosol, plastid	70.17	69.95
CDX69560	Canola	cytosol, plastid	70.17	69.95
CDY09883	Canola	plastid	69.86	69.65
AT5G14760.1	Thale cress	plastid	69.86	69.43
Os02t0134400-01	Rice	plastid	68.47	68.68
HORVU6Hr1G017860.12	Barley	plastid	68.01	68.11
TraesCS6A01G099200.1	Wheat	mitochondrion, plastid	67.39	68.02
TraesCS6D01G083200.1	Wheat	plastid	67.08	67.71
TraesCS6B01G127300.1	Wheat	plastid	67.08	67.71
EES04469	Sorghum	plastid	67.54	66.82
Zm00001d015183_P002	Maize	plastid	67.23	65.12
KRH76805	Soybean	mitochondrion	27.82	28.57
KRH28665	Soybean	mitochondrion	27.67	28.41
KRH69929	Soybean	mitochondrion	27.82	28.39
KRH75678	Soybean	plastid	4.79	19.25

Protein Annotations

KEGG:00250+1.4.3.16	KEGG:00760+1.4.3.16	Gene3D:1.20.58.100	EntrezGene:100782806	Gene3D:3.50.50.60	Gene3D:3.90.700.10
MapMan:7.9.1.1	EMBL:ACUP02002788	ncoils:Coil	InterPro:FAD-binding_2	InterPro:FAD/NAD-bd_sf	InterPro:Fum_R/Succ_DH_flav-like_C_sf
InterPro:Fum_Rdtase/Succ_DH_flav-like_C	EnsemblPlantsGene:GLYMA_05G007600	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0008734
GO:GO:0009058	GO:GO:0009435	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016491
GO:GO:0019363	GO:GO:0044318	GO:GO:0055114	UniProt:I1K1F9	InterPro:IPR027477	InterPro:IPR036188
ProteinID:KRH56610.1	EnsemblPlants:KRH56611	ProteinID:KRH56611	ProteinID:KRH56611.1	InterPro:NadB	PFAM:PF00890
PFAM:PF02910	PRINTS:PR00368	PANTHER:PTHR42716	PANTHER:PTHR42716:SF2	MetaCyc:PWY-5316	MetaCyc:PWY-7342
SUPFAM:SSF46977	SUPFAM:SSF51905	SUPFAM:SSF56425	InterPro:Succ_DH/fumarate_Rdtase_cat_sf	TIGRFAMs:TIGR00551	UniParc:UPI0002339DEF

Description

hypothetical protein

Coordinates

chr5:+:717221..722645

Molecular Weight (calculated)

71437.0 Da

IEP (calculated)

7.620

GRAVY (calculated)

-0.147

Length

647 amino acids

Sequence
(BLAST)

001: MATCVPAVSG ALHYGVTNCK GHSYRRSASF SDVPNTGFLQ KDLSWSKVVS KVLQIHRCGF SAPPLHKDQK LFKVISSWKK DSPTKYFDFI VIGSGIAGLR
101: YALEVAKYGS VAVITKAESH ECNTNYAQGG VSAVLCPSDS VESHIKDTIV AGAYLCDEES VRVVCTEGPE RVRELIAMGA SFDHGEDGNL HLMREGGHSH
201: HRIVHAADMT GKEIERALLK EVISNPRIFV FEHHFAIDLL TCQDRSDMIC LGVDTLNSKT LEVIRFLSKV TLLASGGAGH IYPKTTNPLV ATGDGIAMAH
301: RAQAVISNME FVQFHPTALA DEGLPIKPTK PRENAFLITE AVRGDGGILY NFGMERFMPL YDERAELAPR DVVARSIDDQ LKKRHEKYVL LDISHKPKEE
401: ILSHFPNIAS TCLQYGLDIT RRPIPVVPAA HYMCGGVQAG LQGETNVKGL YVAGEVACTG LHGANRLASN SLLEALVFAR RAVQPSVDHM KGSSLDLTAS
501: NLWPRPVVPL PLGSNVTDKI MSTTKELRAE LQSIMWDYVG IVRSTMRLET AEQKIGSLEA KWEESLFQHG WKPTMVGPEI CEMRNLFCCA KLVVSSALSR
601: HESRGLHYTV DFPYLEESKR LPTIIFPSSP VNSTWSSRQL HKQPMYQ

Best Arabidopsis Sequence Match ( AT5G14760.1 )
(BLAST)

001: MAAHVSTGNI HNFYLAGQVY RGQAFSWSSA STFMANPFKE PSWSSGVFKA LKAERCGCYS RGISPISETS KPIRAVSVSS STKYYDFTVI GSGVAGLRYA
101: LEVAKQGTVA VITKDEPHES NTNYAQGGVS AVLCPLDSVE SHMRDTMVAG AHLCDEETVR VVCTEGPERI RELIAMGASF DHGEDGNLHL AREGGHSHCR
201: IVHAADMTGR EIERALLEAV LNDPNISVFK HHFAIDLLTS QDGLNTVCHG VDTLNIKTNE VVRFISKVTL LASGGAGHIY PSTTNPLVAT GDGMAMAHRA
301: QAVISNMEFV QFHPTALADE GLPIKLQTAR ENAFLITEAV RGDGGILYNL GMERFMPVYD ERAELAPRDV VARSIDDQLK KRNEKYVLLD ISHKPREKIL
401: AHFPNIASEC LKHGLDITRQ PIPVVPAAHY MCGGVRAGLQ GETNVLGLFV AGEVACTGLH GANRLASNSL LEALVFARRA VQPSTELMKR TRLDVCASEK
501: WTRPVVATAR LLGDEVIAKI IALTKEVRRE LQEVMWKYVG IVRSTIRLTT AERKIAELEA KWETFLFEHG WEQTVVALEA CEMRNLFCCA KLVVSSALAR
601: HESRGLHYMT DFPFVEESKR IPTIILPSSP TTASWSSRRL QNISSSSLID C

Arabidopsis Description

AOL-aspartate oxidase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94AY1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.