CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid

Predictor Summary:

plastid 4
nucleus 1
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX76690
CDX92171
CDX93919
CDX95810
CDY53722
CDY56452

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G14760.1	CDX92171	AT3G17860.1	21798944
AT5G14760.1	CDX95810	AT3G17860.1	21798944
AT5G14760.1	CDX76690	AT3G63210.1	21798944
AT5G14760.1	CDX93919	AT3G63210.1	21798944
AT5G14760.1	CDY53722	AT3G63210.1	21798944
AT5G14760.1	CDY56452	AT3G63210.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra008739.1-P	Field mustard	cytosol, plastid	100.0	100.0
CDY09883	Canola	plastid	98.0	98.0
AT5G14760.1	Thale cress	plastid	83.82	83.56
Solyc12g014530.1.1	Tomato	plastid	71.49	76.69
Solyc01g056580.2.1	Tomato	cytosol	43.76	73.58
PGSC0003DMT400033442	Potato	mitochondrion	72.57	73.02
VIT_14s0066g01240.t01	Wine grape	cytosol, plastid	73.34	71.58
KRH56611	Soybean	plastid	69.95	70.17
GSMUA_Achr10P...	Banana	plastid	62.87	68.23
TraesCS6B01G127300.1	Wheat	plastid	67.18	68.02
Os02t0134400-01	Rice	plastid	67.49	67.91
TraesCS6D01G083200.1	Wheat	plastid	67.03	67.86
TraesCS6A01G099200.1	Wheat	mitochondrion, plastid	67.03	67.86
HORVU6Hr1G017860.12	Barley	plastid	67.03	67.34
EES04469	Sorghum	plastid	67.8	67.28
Zm00001d015183_P002	Maize	plastid	67.03	65.12
CDY57124	Canola	mitochondrion	28.97	29.98
CDY30754	Canola	mitochondrion	28.97	29.98
CDX81369	Canola	mitochondrion	28.97	29.94
CDY53847	Canola	mitochondrion	28.81	29.82
CDY49839	Canola	mitochondrion	28.81	29.78
CDY36482	Canola	mitochondrion	28.35	29.07
CDY29234	Canola	mitochondrion	28.04	28.75
CDY71819	Canola	mitochondrion, peroxisome, plastid	5.55	25.71
CDX81366	Canola	cytosol, nucleus, peroxisome	2.0	18.84
CDY52159	Canola	mitochondrion, nucleus, plastid	4.16	15.88
CDY53401	Canola	extracellular	3.24	14.69

Protein Annotations

KEGG:00250+1.4.3.16	KEGG:00760+1.4.3.16	Gene3D:1.20.58.100	Gene3D:3.50.50.60	Gene3D:3.90.700.10	MapMan:7.9.1.1
GO:A0A078BXQ1	EnsemblPlants:CDX69560	ProteinID:CDX69560	ProteinID:CDX69560.1	ncoils:Coil	InterPro:FAD-binding_2
InterPro:FAD/NAD-bd_sf	InterPro:Fum_R/Succ_DH_flav-like_C_sf	InterPro:Fum_Rdtase/Succ_DH_flav-like_C	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0008734	GO:GO:0009058	GO:GO:0009435	GO:GO:0009987	GO:GO:0016491	GO:GO:0044318
GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00135568001	InterPro:IPR027477	InterPro:IPR036188	InterPro:NadB	PFAM:PF00890
PFAM:PF02910	PANTHER:PTHR42716	PANTHER:PTHR42716:SF2	MetaCyc:PWY-5316	MetaCyc:PWY-7342	SUPFAM:SSF46977
SUPFAM:SSF51905	SUPFAM:SSF56425	InterPro:Succ_DH/fumarate_Rdtase_cat_sf	TIGRFAMs:TIGR00551	UniPathway:UPA00253	UniParc:UPI00025451A0

Description

BnaA10g19090D

Coordinates

chrLK031790:-:812802..815750

Molecular Weight (calculated)

71037.8 Da

IEP (calculated)

7.040

GRAVY (calculated)

-0.126

Length

649 amino acids

Sequence
(BLAST)

001: MAAYVSVGNI HDLFLSGQGY KGHDSWSSGF TFRANSFKDL SWSSGVSKAL KAERCGCYSR VVSTFNESSK INTSIRAVSS STKYYDFTVI GSGVAGLRYA
101: LEVAKQGTVA VITKDEPHES NTNYAQGGVS AVLCPLDSVE SHMQDTMVAG AHLCDEETVR VVCTEGPERI RELIAMGASF DHGEDGNLHL AREGGHSHRR
201: IVHAADMTGR EIERALLEAV LNDPNISVFK HHFAIDLLTS QDGLDTVCHG VDTLNIKTNE VVRFISKVTL LASGGAGHIY PSTTNPLVAT GDGMAMAHRA
301: QAVISNMEFV QFHPTALADE GLPIKPQTAR ENAFLITEAV RGDGGILYNL AMERFMPAYD ERAELAPRDV VARSIDDQLK KRKEKYVLLD ISHKPREKIL
401: AHFPNIASEC LKHGLDITRQ PIPVVPAAHY MCGGVRAGLQ GETNVLGLFV AGEVACTGLH GANRLASNSL LEALVFARRA VQPSTDLMKS TRLDVSASEK
501: WTRPVVATAR SLGEDVISKI LALTREVRRE LQGVMWKYVG IVRSTTRLNT AERKIAELEA KWETFLFEHG WEQTVVALEA CEMRNLFCCA KLVVSSALAR
601: HESRGLHYTT DFPFVEESKR IPTIILPSSP TTASWSSRQL QNISSTSVL

Best Arabidopsis Sequence Match ( AT5G14760.1 )
(BLAST)

001: MAAHVSTGNI HNFYLAGQVY RGQAFSWSSA STFMANPFKE PSWSSGVFKA LKAERCGCYS RGISPISETS KPIRAVSVSS STKYYDFTVI GSGVAGLRYA
101: LEVAKQGTVA VITKDEPHES NTNYAQGGVS AVLCPLDSVE SHMRDTMVAG AHLCDEETVR VVCTEGPERI RELIAMGASF DHGEDGNLHL AREGGHSHCR
201: IVHAADMTGR EIERALLEAV LNDPNISVFK HHFAIDLLTS QDGLNTVCHG VDTLNIKTNE VVRFISKVTL LASGGAGHIY PSTTNPLVAT GDGMAMAHRA
301: QAVISNMEFV QFHPTALADE GLPIKLQTAR ENAFLITEAV RGDGGILYNL GMERFMPVYD ERAELAPRDV VARSIDDQLK KRNEKYVLLD ISHKPREKIL
401: AHFPNIASEC LKHGLDITRQ PIPVVPAAHY MCGGVRAGLQ GETNVLGLFV AGEVACTGLH GANRLASNSL LEALVFARRA VQPSTELMKR TRLDVCASEK
501: WTRPVVATAR LLGDEVIAKI IALTKEVRRE LQEVMWKYVG IVRSTIRLTT AERKIAELEA KWETFLFEHG WEQTVVALEA CEMRNLFCCA KLVVSSALAR
601: HESRGLHYMT DFPFVEESKR IPTIILPSSP TTASWSSRRL QNISSSSLID C

Arabidopsis Description

AOL-aspartate oxidase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94AY1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.