CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
nucleus 1
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER91113
EER94230
EER98873
EES15016

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G14760.1	EER98873	AT3G17860.1	21798944
AT5G14760.1	EES15016	AT3G17860.1	21798944
AT5G14760.1	EER91113	AT3G63210.1	21798944
AT5G14760.1	EER94230	AT3G63210.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d015183_P002	Maize	plastid	90.67	88.77
Os02t0134400-01	Rice	plastid	85.63	86.82
TraesCS6A01G099200.1	Wheat	mitochondrion, plastid	83.94	85.65
TraesCS6B01G127300.1	Wheat	plastid	83.79	85.49
TraesCS6D01G083200.1	Wheat	plastid	83.64	85.34
HORVU6Hr1G017860.12	Barley	plastid	80.89	81.89
GSMUA_Achr10P...	Banana	plastid	67.74	74.08
Solyc12g014530.1.1	Tomato	plastid	66.82	72.23
Solyc01g056580.2.1	Tomato	cytosol	41.9	70.98
VIT_14s0066g01240.t01	Wine grape	cytosol, plastid	70.49	69.32
PGSC0003DMT400033442	Potato	mitochondrion	68.2	69.15
Bra008739.1-P	Field mustard	cytosol, plastid	67.28	67.8
CDX69560	Canola	cytosol, plastid	67.28	67.8
KRH56611	Soybean	plastid	66.82	67.54
CDY09883	Canola	plastid	66.67	67.18
AT5G14760.1	Thale cress	plastid	66.67	66.97
KXG35242	Sorghum	cytosol, mitochondrion, plastid	3.21	35.0
EER90804	Sorghum	mitochondrion	28.9	30.48
KXG34367	Sorghum	mitochondrion	28.44	30.05

Protein Annotations

KEGG:00250+1.4.3.16	KEGG:00760+1.4.3.16	Gene3D:1.20.58.100	Gene3D:3.50.50.60	Gene3D:3.90.700.10	MapMan:7.9.1.1
EntrezGene:8069937	UniProt:C5XTX1	EnsemblPlants:EES04469	ProteinID:EES04469	ProteinID:EES04469.1	InterPro:FAD-binding_2
InterPro:FAD/NAD-bd_sf	InterPro:Fum_R/Succ_DH_flav-like_C_sf	InterPro:Fum_Rdtase/Succ_DH_flav-like_C	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0008734	GO:GO:0009058	GO:GO:0009435	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987
GO:GO:0016491	GO:GO:0019363	GO:GO:0044318	GO:GO:0055114	InterPro:IPR027477	InterPro:IPR036188
InterPro:NadB	PFAM:PF00890	PFAM:PF02910	PRINTS:PR00368	PANTHER:PTHR42716	PANTHER:PTHR42716:SF2
MetaCyc:PWY-5316	MetaCyc:PWY-7342	EnsemblPlantsGene:SORBI_3004G032400	SUPFAM:SSF46977	SUPFAM:SSF51905	SUPFAM:SSF56425
unigene:Sbi.19518	InterPro:Succ_DH/fumarate_Rdtase_cat_sf	TIGRFAMs:TIGR00551	UniParc:UPI0001A8538E	RefSeq:XP_002451493.1	SEG:seg

Description

hypothetical protein

Coordinates

chr4:+:2615748..2620550

Molecular Weight (calculated)

72037.0 Da

IEP (calculated)

6.787

GRAVY (calculated)

-0.221

Length

654 amino acids

Sequence
(BLAST)

001: MANLTNGFAS LHCAGAMHVD KGHMQASGLP FLSFRRCSKL DISRLGTVPR FMGAKSATVS QHHVRHRISA TRASTFSCLQ DDTTKFFDFV VIGSGVAGLR
101: YALEVSKHGS VAIITKAEPY ESNTNYAQGG VSAVLCPSDS VESHMEDTIV AGAYLCDEET VRVVCTEGPE RVKELIAMGA SFDHGEDGRL HLAREGGHSH
201: NRIVHSADMT GREIERALLQ AVDNDDNISL FGHHFAIDLL TCQKNGEIYC YGVDSIDIET QKVVRFISKV TLLASGGVGH IYPTTTNPLV ATGDGIAMSH
301: RAQAVISNME FVQFHPTALS DEGLPIKPKT RRENAFLITE AVRGDGGILY NQSMERFMPM YDDRAELAPR DVVARSIDDQ LKKRGENYVL LDISHKPREK
401: VLAHFPNIAA ECLRYGLDIT RQPIPVVPAA HYMCGGVRAG LQGETNVKGL YVAGEVACTG LHGANRLASN SLLEALVFAR RAVQPSIDHM LDADGDGDGD
501: GDASLAARWA RPTLPWSSLG DGALSDIVER TRQARTELQS VMWEYVGIVR STGRLKQAEW KIGDMESEWE EFLFRRGWKP TMVGIEACEM RNLFCCAKLV
601: VKSALARRES RGLHFTEDFP YLEESRRKPT VIFPAAVQEV TWSSKPLQRQ LQCK

Best Arabidopsis Sequence Match ( AT5G14760.1 )
(BLAST)

001: MAAHVSTGNI HNFYLAGQVY RGQAFSWSSA STFMANPFKE PSWSSGVFKA LKAERCGCYS RGISPISETS KPIRAVSVSS STKYYDFTVI GSGVAGLRYA
101: LEVAKQGTVA VITKDEPHES NTNYAQGGVS AVLCPLDSVE SHMRDTMVAG AHLCDEETVR VVCTEGPERI RELIAMGASF DHGEDGNLHL AREGGHSHCR
201: IVHAADMTGR EIERALLEAV LNDPNISVFK HHFAIDLLTS QDGLNTVCHG VDTLNIKTNE VVRFISKVTL LASGGAGHIY PSTTNPLVAT GDGMAMAHRA
301: QAVISNMEFV QFHPTALADE GLPIKLQTAR ENAFLITEAV RGDGGILYNL GMERFMPVYD ERAELAPRDV VARSIDDQLK KRNEKYVLLD ISHKPREKIL
401: AHFPNIASEC LKHGLDITRQ PIPVVPAAHY MCGGVRAGLQ GETNVLGLFV AGEVACTGLH GANRLASNSL LEALVFARRA VQPSTELMKR TRLDVCASEK
501: WTRPVVATAR LLGDEVIAKI IALTKEVRRE LQEVMWKYVG IVRSTIRLTT AERKIAELEA KWETFLFEHG WEQTVVALEA CEMRNLFCCA KLVVSSALAR
601: HESRGLHYMT DFPFVEESKR IPTIILPSSP TTASWSSRRL QNISSSSLID C

Arabidopsis Description

AOL-aspartate oxidase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94AY1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.