Factsheet for TraesCS6B01G127300.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS4A01G295300.1
TraesCS4B01G018400.1
TraesCS4B01G364700.1
TraesCS4D01G016600.1
TraesCS5A01G204900.1
TraesCS5A01G533000.1
TraesCS5A01G533100.1
TraesCS5B01G203400.2
TraesCS5D01G211200.2
TraesCSU01G139000.1
TraesCSU01G139100.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G14760.1	TraesCS4B01G364700.1	AT3G17860.1	21798944
AT5G14760.1	TraesCS5A01G204900.1	AT3G17860.1	21798944
AT5G14760.1	TraesCS5A01G533000.1	AT3G17860.1	21798944
AT5G14760.1	TraesCS5A01G533100.1	AT3G17860.1	21798944
AT5G14760.1	TraesCS5B01G203400.2	AT3G17860.1	21798944
AT5G14760.1	TraesCS5D01G211200.2	AT3G17860.1	21798944
AT5G14760.1	TraesCSU01G139000.1	AT3G17860.1	21798944
AT5G14760.1	TraesCSU01G139100.1	AT3G17860.1	21798944
AT5G14760.1	TraesCS4A01G295300.1	AT3G63210.1	21798944
AT5G14760.1	TraesCS4B01G018400.1	AT3G63210.1	21798944
AT5G14760.1	TraesCS4D01G016600.1	AT3G63210.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G099200.1	Wheat	mitochondrion, plastid	99.06	99.06
TraesCS6D01G083200.1	Wheat	plastid	98.91	98.91
HORVU6Hr1G017860.12	Barley	plastid	93.14	92.41
Os02t0134400-01	Rice	plastid	86.43	85.89
EES04469	Sorghum	plastid	85.49	83.79
Zm00001d015183_P002	Maize	plastid	83.15	79.79
GSMUA_Achr10P...	Banana	plastid	68.49	73.41
Solyc12g014530.1.1	Tomato	plastid	68.02	72.07
Solyc01g056580.2.1	Tomato	cytosol	42.43	70.47
PGSC0003DMT400033442	Potato	mitochondrion	69.58	69.15
VIT_14s0066g01240.t01	Wine grape	cytosol, plastid	70.83	68.27
AT5G14760.1	Thale cress	plastid	68.33	67.28
CDX69560	Canola	cytosol, plastid	68.02	67.18
Bra008739.1-P	Field mustard	cytosol, plastid	68.02	67.18
KRH56611	Soybean	plastid	67.71	67.08
CDY09883	Canola	plastid	67.55	66.72
TraesCS2B01G267100.1	Wheat	mitochondrion	26.83	30.12
TraesCS5B01G414900.1	Wheat	mitochondrion, plastid	28.39	29.31

Protein Annotations

KEGG:00250+1.4.3.16	KEGG:00760+1.4.3.16	Gene3D:1.20.58.100	Gene3D:3.50.50.60	Gene3D:3.90.700.10	MapMan:7.9.1.1
ncoils:Coil	InterPro:FAD-binding_2	InterPro:FAD/NAD-bd_sf	InterPro:Fum_R/Succ_DH_flav-like_C_sf	InterPro:Fum_Rdtase/Succ_DH_flav-like_C	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0008734	GO:GO:0009058	GO:GO:0009435	GO:GO:0009507
GO:GO:0009536	GO:GO:0009987	GO:GO:0016491	GO:GO:0055114	InterPro:IPR027477	InterPro:IPR036188
InterPro:NadB	PFAM:PF00890	PFAM:PF02910	PIRSF:PIRSF000171	PRINTS:PR00368	PANTHER:PTHR42716
PANTHER:PTHR42716:SF2	SUPFAM:SSF46977	SUPFAM:SSF51905	SUPFAM:SSF56425	InterPro:Succ_DH/fumarate_Rdtase_cat_sf	TIGRFAMs:TIGR00551
EnsemblPlantsGene:TraesCS6B01G127300	EnsemblPlants:TraesCS6B01G127300.1	:	:	:	:

Description

No Description!

Coordinates

chr6B:-:122967393..122971103

Molecular Weight (calculated)

70784.0 Da

IEP (calculated)

7.348

GRAVY (calculated)

-0.206

Length

641 amino acids

Sequence
(BLAST)

001: MAKLMGGSAG FHVQGAHMQA SRPPSLSFRT CAQLEISRFC TIPRFMGVKA VSASQQHIRH RFSSIRASAL PRMQDDTTRY FDFVVIGSGV AGLRYALEVS
101: KHGSVAIITK AEPHESNTNY AQGGVSAVLC PKDSVESHMQ DTIVAGAHLC DEETVRIVCT EGPERVKELI AMGASFDHGE DGRLHLAREG GHSHNRIVHS
201: ADMTGKEIER ALLQAVENDE NISVFGHHFA IDLLTCQNNG EIFCYGVDSL DTKAQKVVRF ISKVTLLASG GAGHIYPTTT NPPVATGDGI AMCHRAQAVI
301: SNMEFVQFHP TALSDEGLPI KPAKIRDNAF LVTEAVRGDG GILYNQSMER FMPLYDDRAE LAPRDVVARS IDDQLKKRGE KYVLLDISHK PREKILAHFP
401: NIAAECLRHG LDITQQPIPV VPAAHYMCGG VRAGLQGETS VKGLYVAGEV ACTGLHGANR LASNSLLEAL VFAQRAVQPS IDHMVDADAD PCLAEKWARP
501: MLSVSIKDSA LSDIIERTKK TRMELQSIMW EYVGIVRSTN RLKNAEWKIG DLESEWEEFL FRRGWKPATV GIEACEMRNL FCCAKLVVKS ALARRESRGL
601: HFTEDFPYLE ESKRKPTVIF PTAIQELTWS SKPLQRQLQC K

Best Arabidopsis Sequence Match ( AT5G14760.1 )
(BLAST)

001: MAAHVSTGNI HNFYLAGQVY RGQAFSWSSA STFMANPFKE PSWSSGVFKA LKAERCGCYS RGISPISETS KPIRAVSVSS STKYYDFTVI GSGVAGLRYA
101: LEVAKQGTVA VITKDEPHES NTNYAQGGVS AVLCPLDSVE SHMRDTMVAG AHLCDEETVR VVCTEGPERI RELIAMGASF DHGEDGNLHL AREGGHSHCR
201: IVHAADMTGR EIERALLEAV LNDPNISVFK HHFAIDLLTS QDGLNTVCHG VDTLNIKTNE VVRFISKVTL LASGGAGHIY PSTTNPLVAT GDGMAMAHRA
301: QAVISNMEFV QFHPTALADE GLPIKLQTAR ENAFLITEAV RGDGGILYNL GMERFMPVYD ERAELAPRDV VARSIDDQLK KRNEKYVLLD ISHKPREKIL
401: AHFPNIASEC LKHGLDITRQ PIPVVPAAHY MCGGVRAGLQ GETNVLGLFV AGEVACTGLH GANRLASNSL LEALVFARRA VQPSTELMKR TRLDVCASEK
501: WTRPVVATAR LLGDEVIAKI IALTKEVRRE LQEVMWKYVG IVRSTIRLTT AERKIAELEA KWETFLFEHG WEQTVVALEA CEMRNLFCCA KLVVSSALAR
601: HESRGLHYMT DFPFVEESKR IPTIILPSSP TTASWSSRRL QNISSSSLID C

Arabidopsis Description

AOL-aspartate oxidase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94AY1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.