CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX76690
CDX92171
CDX93919
CDX95810
CDY53722
CDY56452

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G14760.1	CDX92171	AT3G17860.1	21798944
AT5G14760.1	CDX95810	AT3G17860.1	21798944
AT5G14760.1	CDX76690	AT3G63210.1	21798944
AT5G14760.1	CDX93919	AT3G63210.1	21798944
AT5G14760.1	CDY53722	AT3G63210.1	21798944
AT5G14760.1	CDY56452	AT3G63210.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69560	Canola	cytosol, plastid	98.0	98.0
AT5G14760.1	Thale cress	plastid	83.67	83.41
Solyc12g014530.1.1	Tomato	plastid	71.03	76.2
Solyc01g056580.2.1	Tomato	cytosol	43.45	73.06
PGSC0003DMT400033442	Potato	mitochondrion	71.96	72.4
VIT_14s0066g01240.t01	Wine grape	cytosol, plastid	72.73	70.98
KRH56611	Soybean	plastid	69.65	69.86
GSMUA_Achr10P...	Banana	plastid	62.56	67.89
TraesCS6B01G127300.1	Wheat	plastid	66.72	67.55
TraesCS6D01G083200.1	Wheat	plastid	66.56	67.39
TraesCS6A01G099200.1	Wheat	mitochondrion, plastid	66.56	67.39
Os02t0134400-01	Rice	plastid	66.87	67.29
HORVU6Hr1G017860.12	Barley	plastid	66.56	66.87
EES04469	Sorghum	plastid	67.18	66.67
Zm00001d015183_P002	Maize	plastid	66.56	64.67
CDY57124	Canola	mitochondrion	28.97	29.98
CDY30754	Canola	mitochondrion	28.97	29.98
CDX81369	Canola	mitochondrion	28.97	29.94
CDY53847	Canola	mitochondrion	28.81	29.82
CDY49839	Canola	mitochondrion	28.81	29.78
CDY36482	Canola	mitochondrion	28.35	29.07
CDY29234	Canola	mitochondrion	28.04	28.75
CDY71819	Canola	mitochondrion, peroxisome, plastid	5.7	26.43
CDX81366	Canola	cytosol, nucleus, peroxisome	2.0	18.84
CDY52159	Canola	mitochondrion, nucleus, plastid	4.31	16.47
CDY53401	Canola	extracellular	3.24	14.69

Protein Annotations

KEGG:00250+1.4.3.16	KEGG:00760+1.4.3.16	Gene3D:1.20.58.100	Gene3D:3.50.50.60	Gene3D:3.90.700.10	MapMan:7.9.1.1
GO:A0A078FCV1	UniProt:A0A078FCV1	EnsemblPlants:CDY09883	ProteinID:CDY09883	ProteinID:CDY09883.1	ncoils:Coil
InterPro:FAD-binding_2	InterPro:FAD/NAD-bd_sf	InterPro:Fum_R/Succ_DH_flav-like_C_sf	InterPro:Fum_Rdtase/Succ_DH_flav-like_C	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0008734	GO:GO:0009058	GO:GO:0009435	GO:GO:0009507	GO:GO:0009536
GO:GO:0009987	GO:GO:0016491	GO:GO:0019363	GO:GO:0044318	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00031639001
InterPro:IPR027477	InterPro:IPR036188	InterPro:NadB	PFAM:PF00890	PFAM:PF02910	PANTHER:PTHR42716
PANTHER:PTHR42716:SF2	MetaCyc:PWY-5316	MetaCyc:PWY-7342	SUPFAM:SSF46977	SUPFAM:SSF51905	SUPFAM:SSF56425
InterPro:Succ_DH/fumarate_Rdtase_cat_sf	TIGRFAMs:TIGR00551	UniPathway:UPA00253	UniParc:UPI0004EDE4D0	:	:

Description

BnaC09g42780DL-aspartate oxidase [Source:UniProtKB/TrEMBL;Acc:A0A078FCV1]

Coordinates

chrLK031999:+:838513..841486

Molecular Weight (calculated)

71100.0 Da

IEP (calculated)

7.245

GRAVY (calculated)

-0.126

Length

649 amino acids

Sequence
(BLAST)

001: MAAYVSVGNI HDLFLSGQGY RGHGSWSSGF TFRANSFKDL SWSSGVSKAL KAERCGCYSR GVSTFNESSK INTSIRAVSS STKYYDFTVI GSGVAGLRYA
101: LEVAKQGTVA VITKDEPHES NTNYAQGGVS AVLCPLDSVE SHMQDTMVAG AHLCDEETVR VVCTEGPERI RELIAMGASF DHGEDGNLHL AREGGHSHRR
201: IVHAADMTGR EIERALLEAV LNDPNISVFK HHFAIDLLTS QDGLDTVCHG VDTLNIKTNE VVRFISKVTL LASGGAGHIY PSTTNPLVAT GDGMSMAHRA
301: QAVISNMEFV QFHPTALADE GLPIKPQTAR ENAFLITEAV RGDGGILYNL AMERFMPVYD ERAELAPRDV VARSIDDQLK KRKEKYVLLD ISHKPREKIL
401: AHFPNIASEC LKHGLDITRQ PIPVVPAAHY MCGGVRAGLQ GETNVIGLFV AGEVACTGLH GANRLASNSL LEALVFARRA VQPSTELMKS TRLYLTASEK
501: WSRPVVATAR SLGEDVISKI LALTREVRRE LQGVMWKYVG IVRSTTRLNT AERKIAELEA KWETFLFEHG WEQTVVALEA CEMRNLFCCA KLVVSSALAR
601: HESRGLHYTT DFPFVEESKR IPTIILPSSP TTASWSSRQL QNISSTSLI

Best Arabidopsis Sequence Match ( AT5G14760.1 )
(BLAST)

001: MAAHVSTGNI HNFYLAGQVY RGQAFSWSSA STFMANPFKE PSWSSGVFKA LKAERCGCYS RGISPISETS KPIRAVSVSS STKYYDFTVI GSGVAGLRYA
101: LEVAKQGTVA VITKDEPHES NTNYAQGGVS AVLCPLDSVE SHMRDTMVAG AHLCDEETVR VVCTEGPERI RELIAMGASF DHGEDGNLHL AREGGHSHCR
201: IVHAADMTGR EIERALLEAV LNDPNISVFK HHFAIDLLTS QDGLNTVCHG VDTLNIKTNE VVRFISKVTL LASGGAGHIY PSTTNPLVAT GDGMAMAHRA
301: QAVISNMEFV QFHPTALADE GLPIKLQTAR ENAFLITEAV RGDGGILYNL GMERFMPVYD ERAELAPRDV VARSIDDQLK KRNEKYVLLD ISHKPREKIL
401: AHFPNIASEC LKHGLDITRQ PIPVVPAAHY MCGGVRAGLQ GETNVLGLFV AGEVACTGLH GANRLASNSL LEALVFARRA VQPSTELMKR TRLDVCASEK
501: WTRPVVATAR LLGDEVIAKI IALTKEVRRE LQEVMWKYVG IVRSTIRLTT AERKIAELEA KWETFLFEHG WEQTVVALEA CEMRNLFCCA KLVVSSALAR
601: HESRGLHYMT DFPFVEESKR IPTIILPSSP TTASWSSRRL QNISSSSLID C

Arabidopsis Description

AOL-aspartate oxidase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94AY1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.