Factsheet for TraesCS2B01G267100.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS2A01G298400.1
TraesCS2B01G314900.1
TraesCS2D01G296500.1
TraesCS4A01G418100.1
TraesCS7A01G314000.1
TraesCS7A01G319300.1
TraesCS7B01G214900.1
TraesCS7B01G220100.1
TraesCS7D01G064400.1
TraesCS7D01G311200.1
TraesCS7D01G315800.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G66760.1	TraesCS7A01G319300.1	AT1G08480.1	12970493
AT5G66760.1	TraesCS7B01G220100.1	AT1G08480.1	12970493
AT5G66760.1	TraesCS7D01G315800.1	AT1G08480.1	12970493
AT5G66760.1	TraesCS2A01G298400.1	AT1G47420.1	12970493
AT5G66760.1	TraesCS2B01G314900.1	AT1G47420.1	12970493
AT5G66760.1	TraesCS2D01G296500.1	AT1G47420.1	12970493
AT5G66760.1	TraesCS4A01G418100.1	AT1G47420.1	12970493
AT5G66760.1	TraesCS7D01G064400.1	AT1G47420.1	12970493
AT5G66760.1	TraesCS7A01G314000.1	AT3G27380.1	12970493
AT5G66760.1	TraesCS7B01G214900.1	AT3G27380.1	12970493
AT5G66760.1	TraesCS7D01G311200.1	AT3G27380.1	12970493
AT5G66760.1	TraesCS7A01G314000.1	AT5G40650.1	12970493
AT5G66760.1	TraesCS7B01G214900.1	AT5G40650.1	12970493
AT5G66760.1	TraesCS7D01G311200.1	AT5G40650.1	12970493

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G255100.1	Wheat	plastid	98.77	91.11
TraesCS2D01G255500.1	Wheat	mitochondrion, plastid	98.6	90.95
Zm00001d008855_P001	Maize	cytosol, mitochondrion, peroxisome	35.03	88.5
HORVU2Hr1G061040.10	Barley	mitochondrion	79.86	86.2
Os07t0134800-01	Rice	mitochondrion	93.52	84.76
TraesCS5B01G414900.1	Wheat	mitochondrion, plastid	92.12	84.7
GSMUA_Achr7P00810_001	Banana	cytosol	88.62	84.47
Solyc02g085350.2.1	Tomato	mitochondrion	88.27	80.13
CDY57124	Canola	mitochondrion	87.92	80.06
PGSC0003DMT400038576	Potato	mitochondrion	88.09	79.84
Bra012100.1-P	Field mustard	mitochondrion	87.22	79.81
CDX81369	Canola	mitochondrion	87.74	79.78
CDY53847	Canola	mitochondrion	87.57	79.74
CDY30754	Canola	mitochondrion	87.57	79.74
CDY49839	Canola	mitochondrion	87.57	79.62
AT5G66760.1	Thale cress	mitochondrion	88.27	79.5
KRH69929	Soybean	mitochondrion	87.74	79.02
KRH76805	Soybean	mitochondrion	86.69	78.57
KRH28665	Soybean	mitochondrion	86.69	78.57
Zm00001d014927_P001	Maize	cytosol, mitochondrion, peroxisome	17.34	77.34
Zm00001d029250_P001	Maize	cytosol	9.98	77.03
Bra024466.1-P	Field mustard	mitochondrion	84.24	76.11
CDY36482	Canola	mitochondrion	84.06	75.83
CDY29234	Canola	mitochondrion	83.89	75.67
VIT_04s0023g01650.t01	Wine grape	mitochondrion	88.27	75.22
AT2G18450.1	Thale cress	mitochondrion	82.84	74.84
Zm00001d038502_P001	Maize	cytosol	19.44	50.92
Zm00001d025385_P001	Maize	cytosol	11.03	48.46
Zm00001d029316_P001	Maize	cytosol	13.66	40.41
TraesCS6B01G127300.1	Wheat	plastid	30.12	26.83

Protein Annotations

Gene3D:1.20.58.100	MapMan:2.3.6.1.1	Gene3D:3.50.50.60	Gene3D:4.10.80.40	InterPro:FAD-binding_2	InterPro:FAD/NAD-bd_sf
InterPro:FRD_SDH_FAD_BS	InterPro:Fum_R/Succ_DH_flav-like_C_sf	InterPro:Fum_Rdtase/Succ_DH_flav-like_C	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491
GO:GO:0016627	GO:GO:0022900	GO:GO:0050660	GO:GO:0055114	InterPro:IPR027477	InterPro:IPR036188
PFAM:PF00890	PFAM:PF02910	PIRSF:PIRSF000171	PRINTS:PR00411	ScanProsite:PS00504	PANTHER:PTHR11632
PANTHER:PTHR11632:SF51	SUPFAM:SSF46977	SUPFAM:SSF51905	SUPFAM:SSF56425	InterPro:Succ_DH/fumarate_Rdtase_cat_sf	InterPro:Succ_Dhase_FrdA_Gneg
TIGRFAMs:TIGR01812	EnsemblPlantsGene:TraesCS2B01G267100	EnsemblPlants:TraesCS2B01G267100.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr2B:-:359619058..359638064

Molecular Weight (calculated)

62526.2 Da

IEP (calculated)

6.760

GRAVY (calculated)

-0.295

Length

571 amino acids

Sequence
(BLAST)

001: MWRGCVSRGL SKAKASASRL FSTTSSSYTV VDHSYDAVVV GAGGAGLRAA IGLSEHGFST ACITKLFPTR SHTVAAQGGI NAALGNMSED DWRWHMYDTV
101: KGSDWLGGQA YRCACAADRT GHAMLHTLYG QAMKHNTQFF VEYFALDLLM DNEGNCQGVI ALNMEDGTLH RFRATNTILA TGSGYGRAYF SATSAHTCTG
201: DGNAMVARAG LPLQDLEFVQ FHPTGIYGAG CLITEGSRGE GGILRNSEGE RFMERYAPTA KDLASRDVVS RSMTMEIREG RGVGPLKDHI YLHLNHLPPE
301: VLKERLPGIS ETAAIFAGVD VTKEPIPVLP TVHYNMGGIP TNYHGEVVDI KGDNPDTVIP GLMAAGEAAC ASVHGANRLG ANSLLDIVVF GRACANRVAE
401: ISKPGDKQKL LEKGAGEKTI AWLDKLRNAN GSLPTSKIRL NTQRIMQNNA AVFRTQETLE EGCQLISKAW ESYHDVKISD RSLIWNSDLI ETIELENLLI
501: NACITMYSAE ARKESRGAHA REDFTTRDDE RWMKHSLGYW ENEKVRLAYR PVHMNTLDDE IESFPPKARV Y

Best Arabidopsis Sequence Match ( AT2G18450.1 )
(BLAST)

001: MWRCLRVASS SRRSESNGAF ITSQLSRFFS APPSAGDKSS YTIVDHTYDA VVVGAGGAGL RAAIGLSEHG FNTACITKLF PTRSHTVAAQ GGINAALGNM
101: SVDDWRWHMY DTVKGSDWLG DQDAIQYMCR EAPKAVIELE NYGLPFSRTE DGKIYQRAFG GQSLEFGIGG QAYRCACAAD RTGHALLHTL YGQAMKHNTQ
201: FFVEYFALDL IMNSDGTCQG VIALNMEDGT LHRFHAGSTI LATGGYGRAY FSATSAHTCT GDGNAMVARA GLPLQDLEFV QFHPTGIYGA GCLITEGARG
301: EGGILRNSEG EKFMDRYAPT ARDLASRDVV SRSMTMEIRQ GRGAGPMKDY LYLYLNHLPP EVLKERLPGI SETAAIFAGV DVTREPIPVL PTVHYNMGGI
401: PTNYHGEVIT LRGDDPDAVV PGLMAAGEAA CASVHGANRL GANSLLDIVV FGRACANRVA EIQKPGEKLK PLEKDAGEKS IEWLDRIRNS NGSLPTSKIR
501: LNMQRVMQNN AAVFRTQETL EEGCDLIDKT WDSFGDVKVT DRSMIWNSDL IETMELENLL VNACITMHSA EARKESRGAH AREDFTKRDD ANWMKHTLGY
601: WEEGNVKLEY RPVHMKTLDD EVDTFPPKPR VY

Arabidopsis Description

SDH1-2Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial [Source:UniProtKB/TrEMBL;Acc:A0A178VRF6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.