Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS2B01G314900.1 | Wheat | mitochondrion | 87.56 | 86.03 |
TraesCS2A01G298400.1 | Wheat | mitochondrion, plastid | 86.22 | 84.72 |
Os04t0418000-01 | Rice | mitochondrion | 75.56 | 73.59 |
EER93643 | Sorghum | mitochondrion | 72.0 | 71.05 |
Zm00001d033554_P001 | Maize | mitochondrion | 70.67 | 70.04 |
EES01682 | Sorghum | mitochondrion | 70.67 | 69.74 |
TraesCS7D01G064400.1 | Wheat | plastid | 71.56 | 65.98 |
GSMUA_Achr10P... | Banana | mitochondrion | 54.67 | 52.56 |
Bra014079.1-P | Field mustard | mitochondrion | 52.44 | 49.17 |
VIT_18s0001g10780.t01 | Wine grape | mitochondrion | 52.44 | 48.76 |
CDY17016 | Canola | mitochondrion | 52.0 | 48.75 |
GSMUA_Achr6P25290_001 | Banana | mitochondrion | 58.67 | 48.35 |
GSMUA_Achr6P25260_001 | Banana | mitochondrion | 57.33 | 48.31 |
CDY17074 | Canola | mitochondrion, plastid | 51.11 | 48.12 |
CDY06735 | Canola | plastid | 51.11 | 48.12 |
Bra040955.1-P | Field mustard | plastid | 51.11 | 48.12 |
KRH15341 | Soybean | mitochondrion | 48.89 | 47.41 |
KRH05703 | Soybean | mitochondrion | 47.11 | 47.11 |
PGSC0003DMT400039927 | Potato | mitochondrion | 48.0 | 46.15 |
Solyc12g088900.1.1 | Tomato | mitochondrion | 47.56 | 45.73 |
Zm00001d013526_P002 | Maize | mitochondrion | 69.33 | 45.48 |
CDY17833 | Canola | plastid | 52.44 | 45.38 |
AT1G47420.1 | Thale cress | mitochondrion | 50.22 | 43.97 |
Solyc04g079180.2.1 | Tomato | plastid | 45.78 | 42.92 |
PGSC0003DMT400020707 | Potato | mitochondrion | 44.89 | 42.08 |
CDX80719 | Canola | mitochondrion | 10.67 | 26.37 |
Bra030413.1-P | Field mustard | cytosol | 10.22 | 25.27 |
Protein Annotations
EnsemblPlants:TraesCS2D01G296500.1 | EnsemblPlantsGene:TraesCS2D01G296500 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0016020 |
GO:GO:0045273 | InterPro:DUF4370 | PANTHER:PTHR36139 | PFAM:PF14290 | SEG:seg | MapMan:2.3.6.1.5 |
Description
No Description!
Coordinates
chr2D:+:378895996..378898764
Molecular Weight (calculated)
24241.0 Da
IEP (calculated)
7.044
GRAVY (calculated)
-0.134
Length
225 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAALPSSSA AAVHRFLLIS RPTLSNLPYA SRPAVSRSIT VISGGNNAFS SNFRRLLSSN EKHMPAMSDP QIESALKDLM AASWSELPHS LLEEAKKAVS
101: KSTDDAAGQE ALKNVFRAAE ACEEFGGVLV TLRMALDDLC GLTGENVGPL PGYVEDAVKS TYNRYMTYLE SFGPDEHILR KKVENELGTK MIHLKMKCSG
201: IGSEWGKITL IGTSGISGSY VELRA
101: KSTDDAAGQE ALKNVFRAAE ACEEFGGVLV TLRMALDDLC GLTGENVGPL PGYVEDAVKS TYNRYMTYLE SFGPDEHILR KKVENELGTK MIHLKMKCSG
201: IGSEWGKITL IGTSGISGSY VELRA
001: MGTLGRAIHT VGNRIRGTAQ AQARVGSLLQ GSHHIEKHLS RHRTLITVAP NASVIGDVQI NKGSFISYAS VSRDLQYPRA MGMGQVRRFS EDVSHMPEME
101: DSDVLNAFKD LMAADWAELP SAVVKDAKTA ISKNTDDKAG QEALKNVFRA AEAVEEFGGI LTSIKMEIDD SIGMSGEGVK PLPNDITDAL RTAYQRYAEY
201: LDSFEPEEVY LKKKVEMELG TKMIHLKMRC SGLGSEWGKV TVLGTSGLSG SYVEQRA
101: DSDVLNAFKD LMAADWAELP SAVVKDAKTA ISKNTDDKAG QEALKNVFRA AEAVEEFGGI LTSIKMEIDD SIGMSGEGVK PLPNDITDAL RTAYQRYAEY
201: LDSFEPEEVY LKKKVEMELG TKMIHLKMRC SGLGSEWGKV TVLGTSGLSG SYVEQRA
Arabidopsis Description
SDH5Succinate dehydrogenase subunit 5, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SX77]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.