Skip to main content
crop-pal logo
Potato
Search for another protein from :
Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 1
  • mitochondrion 9
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, plastid
BaCelLo:plastid
EpiLoc:mitochondrion
iPSORT:mitochondrion
MultiLoc:mitochondrion
Plant-mPloc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc12g088900.1.1 Tomato mitochondrion 97.01 97.01
PGSC0003DMT400020707 Potato mitochondrion 75.21 73.33
KRH05703 Soybean mitochondrion 56.84 59.11
CDY06735 Canola plastid 60.26 59.0
Bra040955.1-P Field mustard plastid 59.83 58.58
CDY17074 Canola mitochondrion, plastid 59.83 58.58
KRH15341 Soybean mitochondrion 57.27 57.76
Bra014079.1-P Field mustard mitochondrion 57.69 56.25
CDY17016 Canola mitochondrion 57.69 56.25
VIT_18s0001g10780.t01 Wine grape mitochondrion 58.12 56.2
CDY17833 Canola plastid 58.12 52.31
AT1G47420.1 Thale cress mitochondrion 56.84 51.75
EER93643 Sorghum mitochondrion 48.29 49.56
Zm00001d033554_P001 Maize mitochondrion 47.86 49.34
EES01682 Sorghum mitochondrion 47.86 49.12
TraesCS2A01G298400.1 Wheat mitochondrion, plastid 47.86 48.91
TraesCS2B01G314900.1 Wheat mitochondrion 47.86 48.91
TraesCS4A01G418100.1 Wheat plastid 50.85 48.77
Os04t0418000-01 Rice mitochondrion 47.44 48.05
TraesCS2D01G296500.1 Wheat plastid 46.15 48.0
TraesCS7D01G064400.1 Wheat plastid 49.15 47.13
GSMUA_Achr10P... Banana mitochondrion 47.01 47.01
HORVU7Hr1G012370.2 Barley cytosol, nucleus 50.43 39.86
GSMUA_Achr6P25260_001 Banana mitochondrion 44.87 39.33
GSMUA_Achr6P25290_001 Banana mitochondrion 45.73 39.19
CDX80719 Canola mitochondrion 14.96 38.46
Bra030413.1-P Field mustard cytosol 13.68 35.16
Zm00001d013526_P002 Maize mitochondrion 48.29 32.94
Protein Annotations
EnsemblPlants:PGSC0003DMT400039927EnsemblPlantsGene:PGSC0003DMG400015445EntrezGene:102602567InterPro:DUF4370PANTHER:PTHR36139PFAM:PF14290
PGSC:PGSC0003DMG400015445RefSeq:XP_006342614.1SEG:segUniParc:UPI00029584D8UniProt:M1B8Z7MapMan:2.3.6.1.5
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400015445]
Coordinates
chr12:-:56687061..56690545
Molecular Weight (calculated)
25894.9 Da
IEP (calculated)
6.404
GRAVY (calculated)
-0.258
Length
234 amino acids
Sequence
(BLAST)
001: MQKLKLIQSL YRSVCRRSSA FSVSAAAAAA VNHHSHRDLH FSASPRTPFR ELRHPLTTAI GSTRSFSEDV AHMPDIEDLE IKRAFKDLMA ASWDELPNAV
101: VGDAENALTK STDDKAGQEA LINVFRAAEA VEEFTGILTS LKMEMDDAIG LSGENVKPMS KEFSEAFQTI LQRYNTYLSA FGLEEVYLKK KVEMELGTKM
201: IHLKMRCSGL DSEWGKVTVL GTSGLAGSYV EQRA
Best Arabidopsis Sequence Match ( AT1G47420.1 )
(BLAST)
001: MGTLGRAIHT VGNRIRGTAQ AQARVGSLLQ GSHHIEKHLS RHRTLITVAP NASVIGDVQI NKGSFISYAS VSRDLQYPRA MGMGQVRRFS EDVSHMPEME
101: DSDVLNAFKD LMAADWAELP SAVVKDAKTA ISKNTDDKAG QEALKNVFRA AEAVEEFGGI LTSIKMEIDD SIGMSGEGVK PLPNDITDAL RTAYQRYAEY
201: LDSFEPEEVY LKKKVEMELG TKMIHLKMRC SGLGSEWGKV TVLGTSGLSG SYVEQRA
Arabidopsis Description
SDH5Succinate dehydrogenase subunit 5, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SX77]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.