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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 2
  • mitochondrion 9
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
EpiLoc:mitochondrion
iPSORT:mitochondrion
MultiLoc:mitochondrion
Plant-mPloc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:mitochondrion
 endoplasmic reticulum: 27224218
mitochondrion: 27780359
endoplasmic reticulum: 28499913
mitochondrion: 28499913
msms PMID: 27780359 doi
G Mustafa, S Komatsu
Graduate School of Life and Environmental Science, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH05703 Soybean mitochondrion 88.79 91.56
Solyc04g079180.2.1 Tomato plastid 64.66 62.5
PGSC0003DMT400020707 Potato mitochondrion 62.93 60.83
VIT_18s0001g10780.t01 Wine grape mitochondrion 61.21 58.68
Solyc12g088900.1.1 Tomato mitochondrion 58.19 57.69
PGSC0003DMT400039927 Potato mitochondrion 57.76 57.27
CDY17016 Canola mitochondrion 58.62 56.67
Bra014079.1-P Field mustard mitochondrion 57.76 55.83
Bra040955.1-P Field mustard plastid 56.9 55.23
CDY06735 Canola plastid 56.9 55.23
CDY17074 Canola mitochondrion, plastid 56.47 54.81
CDY17833 Canola plastid 58.19 51.92
AT1G47420.1 Thale cress mitochondrion 56.47 50.97
EER93643 Sorghum mitochondrion 50.0 50.88
Zm00001d033554_P001 Maize mitochondrion 49.14 50.22
EES01682 Sorghum mitochondrion 49.14 50.0
TraesCS2A01G298400.1 Wheat mitochondrion, plastid 49.14 49.78
Os04t0418000-01 Rice mitochondrion 49.14 49.35
TraesCS2B01G314900.1 Wheat mitochondrion 48.71 49.34
TraesCS2D01G296500.1 Wheat plastid 47.41 48.89
GSMUA_Achr10P... Banana mitochondrion 48.71 48.29
TraesCS4A01G418100.1 Wheat plastid 49.57 47.13
TraesCS7D01G064400.1 Wheat plastid 48.71 46.31
GSMUA_Achr6P25260_001 Banana mitochondrion 48.71 42.32
GSMUA_Achr6P25290_001 Banana mitochondrion 49.14 41.76
HORVU7Hr1G012370.2 Barley cytosol, nucleus 50.0 39.19
CDX80719 Canola mitochondrion 14.66 37.36
Bra030413.1-P Field mustard cytosol 13.36 34.07
Zm00001d013526_P002 Maize mitochondrion 50.0 33.82
Protein Annotations
EMBL:ACUP02008578EnsemblPlants:KRH15341EnsemblPlantsGene:GLYMA_14G081700EntrezGene:100527668InterPro:DUF4370PANTHER:PTHR36139
PFAM:PF14290ProteinID:KRH15341ProteinID:KRH15341.1UniParc:UPI00023D401FUniProt:I1M8K9MapMan:2.3.6.1.5
Description
hypothetical protein
Coordinates
chr14:+:7074900..7077809
Molecular Weight (calculated)
25801.0 Da
IEP (calculated)
6.786
GRAVY (calculated)
-0.242
Length
232 amino acids
Sequence
(BLAST)
001: MEKMMRLRPL FRSLSCRSYH AFPFINHVVL RPSLISRSPN PLPSPSHSEC MSPFSMGLGS MRFYSEDLTH VPNIKDPALY NAFKDLMAVS WSELPDSVVS
101: DVKNVLSKNT DDKAGKEAVE NVFRAAEAIE EFGGILVSLK LEFDDSIGLS GEDVKPLPDH IKNALCTTFD RYSTYLNSFG PDENYLRKKV ETELGAKMIH
201: LKMRCSGLGA EWGKVTVLGT SGLAGSYVEQ RA
Best Arabidopsis Sequence Match ( AT1G47420.1 )
(BLAST)
001: MGTLGRAIHT VGNRIRGTAQ AQARVGSLLQ GSHHIEKHLS RHRTLITVAP NASVIGDVQI NKGSFISYAS VSRDLQYPRA MGMGQVRRFS EDVSHMPEME
101: DSDVLNAFKD LMAADWAELP SAVVKDAKTA ISKNTDDKAG QEALKNVFRA AEAVEEFGGI LTSIKMEIDD SIGMSGEGVK PLPNDITDAL RTAYQRYAEY
201: LDSFEPEEVY LKKKVEMELG TKMIHLKMRC SGLGSEWGKV TVLGTSGLSG SYVEQRA
Arabidopsis Description
SDH5Succinate dehydrogenase subunit 5, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SX77]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.