Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 8
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra014079.1-P | Field mustard | mitochondrion | 64.59 | 69.17 |
| Bra040955.1-P | Field mustard | plastid | 64.2 | 69.04 |
| CDY06735 | Canola | plastid | 64.2 | 69.04 |
| CDY17016 | Canola | mitochondrion | 64.2 | 68.75 |
| CDY17074 | Canola | mitochondrion, plastid | 63.81 | 68.62 |
| CDY17833 | Canola | plastid | 64.59 | 63.85 |
| KRH05703 | Soybean | mitochondrion | 50.58 | 57.78 |
| Solyc04g079180.2.1 | Tomato | plastid | 53.7 | 57.5 |
| PGSC0003DMT400020707 | Potato | mitochondrion | 53.31 | 57.08 |
| PGSC0003DMT400039927 | Potato | mitochondrion | 51.75 | 56.84 |
| KRH15341 | Soybean | mitochondrion | 50.97 | 56.47 |
| Solyc12g088900.1.1 | Tomato | mitochondrion | 50.97 | 55.98 |
| VIT_18s0001g10780.t01 | Wine grape | mitochondrion | 50.58 | 53.72 |
| Os04t0418000-01 | Rice | mitochondrion | 45.91 | 51.08 |
| TraesCS2D01G296500.1 | Wheat | plastid | 43.97 | 50.22 |
| TraesCS2B01G314900.1 | Wheat | mitochondrion | 44.75 | 50.22 |
| EER93643 | Sorghum | mitochondrion | 43.97 | 49.56 |
| TraesCS2A01G298400.1 | Wheat | mitochondrion, plastid | 43.97 | 49.34 |
| Zm00001d033554_P001 | Maize | mitochondrion | 43.58 | 49.34 |
| EES01682 | Sorghum | mitochondrion | 43.58 | 49.12 |
| GSMUA_Achr10P... | Banana | mitochondrion | 43.97 | 48.29 |
| TraesCS4A01G418100.1 | Wheat | plastid | 45.14 | 47.54 |
| Bra030413.1-P | Field mustard | cytosol | 16.73 | 47.25 |
| TraesCS7D01G064400.1 | Wheat | plastid | 44.36 | 46.72 |
| CDX80719 | Canola | mitochondrion | 15.18 | 42.86 |
| GSMUA_Achr6P25260_001 | Banana | mitochondrion | 41.25 | 39.7 |
| GSMUA_Achr6P25290_001 | Banana | mitochondrion | 41.63 | 39.19 |
| HORVU7Hr1G012370.2 | Barley | cytosol, nucleus | 44.36 | 38.51 |
| Zm00001d013526_P002 | Maize | mitochondrion | 45.14 | 33.82 |
Protein Annotations
| MapMan:2.3.6.1.5 | EntrezGene:841147 | ProteinID:AAD46040.1 | ProteinID:AEE32168.1 | EMBL:AF344326 | ArrayExpress:AT1G47420 |
| EnsemblPlantsGene:AT1G47420 | RefSeq:AT1G47420 | TAIR:AT1G47420 | RefSeq:AT1G47420-TAIR-G | EnsemblPlants:AT1G47420.1 | TAIR:AT1G47420.1 |
| EMBL:AY034947 | EMBL:AY054563 | EMBL:AY062990 | EMBL:AY084381 | Unigene:At.11510 | EMBL:BT000345 |
| InterPro:DUF4370 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 |
| GO:GO:0005739 | GO:GO:0005743 | GO:GO:0005749 | GO:GO:0006091 | GO:GO:0006099 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009719 | GO:GO:0009735 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0045273 |
| RefSeq:NP_564506.1 | PFAM:PF14290 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 |
| PO:PO:0025281 | PANTHER:PTHR36139 | UniProt:Q9SX77 | Symbol:SDH5 | UniParc:UPI0000001AE5 | : |
Description
SDH5Succinate dehydrogenase subunit 5, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SX77]
Coordinates
chr1:-:17395518..17397263
Molecular Weight (calculated)
28107.6 Da
IEP (calculated)
6.639
GRAVY (calculated)
-0.323
Length
257 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTLGRAIHT VGNRIRGTAQ AQARVGSLLQ GSHHIEKHLS RHRTLITVAP NASVIGDVQI NKGSFISYAS VSRDLQYPRA MGMGQVRRFS EDVSHMPEME
101: DSDVLNAFKD LMAADWAELP SAVVKDAKTA ISKNTDDKAG QEALKNVFRA AEAVEEFGGI LTSIKMEIDD SIGMSGEGVK PLPNDITDAL RTAYQRYAEY
201: LDSFEPEEVY LKKKVEMELG TKMIHLKMRC SGLGSEWGKV TVLGTSGLSG SYVEQRA
101: DSDVLNAFKD LMAADWAELP SAVVKDAKTA ISKNTDDKAG QEALKNVFRA AEAVEEFGGI LTSIKMEIDD SIGMSGEGVK PLPNDITDAL RTAYQRYAEY
201: LDSFEPEEVY LKKKVEMELG TKMIHLKMRC SGLGSEWGKV TVLGTSGLSG SYVEQRA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.