Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 4
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400045282 | Potato | nucleus | 52.54 | 59.18 |
| VIT_18s0166g00090.t01 | Wine grape | nucleus | 46.38 | 50.79 |
| KRH18125 | Soybean | nucleus | 39.86 | 45.83 |
| KRH15991 | Soybean | nucleus | 38.77 | 45.15 |
| KRH53420 | Soybean | nucleus | 40.22 | 44.58 |
| Bra025892.1-P | Field mustard | nucleus | 33.7 | 40.43 |
| CDY50839 | Canola | nucleus | 33.7 | 40.43 |
| AT1G21326.1 | Thale cress | nucleus | 34.42 | 39.75 |
| CDY04618 | Canola | nucleus | 32.97 | 39.57 |
| KRH64520 | Soybean | nucleus, plastid | 34.06 | 39.17 |
| CDY00369 | Canola | nucleus | 30.8 | 36.32 |
| Bra012276.1-P | Field mustard | plastid | 23.55 | 36.31 |
| CDY61066 | Canola | nucleus | 30.43 | 35.9 |
| PGSC0003DMT400073800 | Potato | nucleus | 29.71 | 35.81 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400002024 | EnsemblPlantsGene:PGSC0003DMG400000771 | EntrezGene:102602119 | InterPro:VQ | PANTHER:PTHR33143 | PANTHER:PTHR33143:SF26 |
| PFAM:PF05678 | PGSC:PGSC0003DMG400000771 | RefSeq:XP_006362807.1 | SEG:seg | UniParc:UPI0002948D43 | UniProt:M0ZJH9 |
| MapMan:35.2 | : | : | : | : | : |
Description
Protein MKS1 [Source:PGSC_GENE;Acc:PGSC0003DMG400000771]
Coordinates
chr4:+:58797723..58798972
Molecular Weight (calculated)
30788.2 Da
IEP (calculated)
8.670
GRAVY (calculated)
-0.636
Length
276 amino acids
Sequence
(BLAST)
(BLAST)
001: MPFSSFSTST KFASPYSFLP SFDSQMDQPE NSAGKSPRRE LQGPRPAPLK VRKDSHKIRK PPVPPSQQHH HHHQQPLAPP RPPVIIYTVS PKVIHANPSE
101: FMTLVQRLTG PNHHSATCSS TETATSSFYP FQENMNTGAI SPAARFASIE KTRVPEGKKL QKNCENIENY NYMVHEGIEI GTEIERGGVF PGILSPNPSS
201: LPPIPPNFFS PPSNDPNPLG FFYDLSPVLH NNNNNKNYFE LPNFLPSPSN NNFISPRLFL SPGTPTFDLF NNLFDV
101: FMTLVQRLTG PNHHSATCSS TETATSSFYP FQENMNTGAI SPAARFASIE KTRVPEGKKL QKNCENIENY NYMVHEGIEI GTEIERGGVF PGILSPNPSS
201: LPPIPPNFFS PPSNDPNPLG FFYDLSPVLH NNNNNKNYFE LPNFLPSPSN NNFISPRLFL SPGTPTFDLF NNLFDV
001: MDNRSPRSRG ILGPRPIPLK VRGDSHKIIK KPPLAPPHPQ PQPPQTHQQE PSQSRPPPGP VIIYTVSPRI IHTHPNNFMT LVQRLTGKTS TSTTSSSYSS
101: STSAPKDAST MVDTSHGLIS PAARFAVTEK ANISNELGTF VGGEGTMDQY YHYHHHHHHQ EQQHQNQGFE RPSFHHAGIL SPGPNSLPSV SPDFFSTIGP
201: TDPQGFSSFF NDFNSILQSS PSKIQSPSSM DLFNNFFDS
101: STSAPKDAST MVDTSHGLIS PAARFAVTEK ANISNELGTF VGGEGTMDQY YHYHHHHHHQ EQQHQNQGFE RPSFHHAGIL SPGPNSLPSV SPDFFSTIGP
201: TDPQGFSSFF NDFNSILQSS PSKIQSPSSM DLFNNFFDS
Arabidopsis Description
F16F4.1 protein [Source:UniProtKB/TrEMBL;Acc:Q9LMP5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.