Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 4
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH53420 | Soybean | nucleus | 63.33 | 61.04 |
| KRH18125 | Soybean | nucleus | 48.33 | 48.33 |
| KRH15991 | Soybean | nucleus | 45.83 | 46.41 |
| KRH59551 | Soybean | plastid | 37.5 | 43.27 |
| KRH43402 | Soybean | cytosol, mitochondrion, nucleus, plastid | 34.58 | 41.92 |
| Solyc06g060470.1.1 | Tomato | nucleus | 40.42 | 40.42 |
| PGSC0003DMT400045282 | Potato | nucleus | 41.25 | 40.41 |
| KRH64076 | Soybean | nucleus | 33.75 | 38.21 |
| Bra025892.1-P | Field mustard | nucleus | 35.42 | 36.96 |
| CDY50839 | Canola | nucleus | 35.42 | 36.96 |
| CDY04618 | Canola | nucleus | 35.0 | 36.52 |
| VIT_18s0166g00090.t01 | Wine grape | nucleus | 38.33 | 36.51 |
| KRH53873 | Soybean | nucleus | 32.5 | 35.14 |
| PGSC0003DMT400002024 | Potato | plastid | 39.17 | 34.06 |
| AT1G21326.1 | Thale cress | nucleus | 31.25 | 31.38 |
| CDY61066 | Canola | nucleus | 28.75 | 29.49 |
| CDY00369 | Canola | nucleus | 28.75 | 29.49 |
| Bra012276.1-P | Field mustard | plastid | 21.25 | 28.49 |
Protein Annotations
| EMBL:ACUP02002767 | EnsemblPlants:KRH64520 | EnsemblPlantsGene:GLYMA_04G239400 | InterPro:VQ | PANTHER:PTHR33143 | PANTHER:PTHR33143:SF26 |
| PFAM:PF05678 | ProteinID:KRH64520 | ProteinID:KRH64520.1 | SEG:seg | UniParc:UPI0006EDAE47 | UniProt:A0A0R0KIU2 |
| MapMan:35.2 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr4:-:50786570..50788048
Molecular Weight (calculated)
26257.4 Da
IEP (calculated)
9.605
GRAVY (calculated)
-0.516
Length
240 amino acids
Sequence
(BLAST)
(BLAST)
001: MLVQSSILLS PPPFPSNHNM DQFSHIIPTE RSPRRELQLQ GPRPTPLRIN KDSHKIKKPP LAPQQPSHPH QPPPRQPIII YTVSPKVIHT TPSDFMNLVQ
101: RLTGSSSSSS VVVPNNNNTH VDPFNNGAGM LSPAARYATI EKAMSPMGKK HVLPSGDNII SDVQGIEINI GDGVLERSQQ NMFQGILSPG PASLSPIPSN
201: FFSPPSSDPS MVSFLHDLSP MFQSGRNFME DTKKLDPNGD
101: RLTGSSSSSS VVVPNNNNTH VDPFNNGAGM LSPAARYATI EKAMSPMGKK HVLPSGDNII SDVQGIEINI GDGVLERSQQ NMFQGILSPG PASLSPIPSN
201: FFSPPSSDPS MVSFLHDLSP MFQSGRNFME DTKKLDPNGD
001: MDNRSPRSRG ILGPRPIPLK VRGDSHKIIK KPPLAPPHPQ PQPPQTHQQE PSQSRPPPGP VIIYTVSPRI IHTHPNNFMT LVQRLTGKTS TSTTSSSYSS
101: STSAPKDAST MVDTSHGLIS PAARFAVTEK ANISNELGTF VGGEGTMDQY YHYHHHHHHQ EQQHQNQGFE RPSFHHAGIL SPGPNSLPSV SPDFFSTIGP
201: TDPQGFSSFF NDFNSILQSS PSKIQSPSSM DLFNNFFDS
101: STSAPKDAST MVDTSHGLIS PAARFAVTEK ANISNELGTF VGGEGTMDQY YHYHHHHHHQ EQQHQNQGFE RPSFHHAGIL SPGPNSLPSV SPDFFSTIGP
201: TDPQGFSSFF NDFNSILQSS PSKIQSPSSM DLFNNFFDS
Arabidopsis Description
F16F4.1 protein [Source:UniProtKB/TrEMBL;Acc:Q9LMP5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.