Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH72311 | Soybean | endoplasmic reticulum, plastid, vacuole | 31.25 | 53.33 |
| CDY68621 | Canola | mitochondrion | 28.91 | 49.33 |
| Bra033165.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 28.12 | 48.0 |
| Bra035268.1-P | Field mustard | cytosol, mitochondrion, plasma membrane, plastid | 28.12 | 48.0 |
| CDX86832 | Canola | cytosol, mitochondrion, plasma membrane, plastid | 28.12 | 48.0 |
| CDY25265 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 28.12 | 48.0 |
| CDY62265 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 28.12 | 48.0 |
| CDX90786 | Canola | cytosol, mitochondrion, plasma membrane, plastid | 27.34 | 46.67 |
| CDX94242 | Canola | cytosol | 27.34 | 46.67 |
| CDY05124 | Canola | cytosol, mitochondrion, plasma membrane, plastid | 27.34 | 46.67 |
| Bra000726.1-P | Field mustard | cytosol, mitochondrion, plasma membrane, plastid | 27.34 | 46.67 |
| PGSC0003DMT400067632 | Potato | cytosol | 25.78 | 36.26 |
| VIT_04s0008g06660.t01 | Wine grape | cytosol | 29.69 | 33.93 |
| Zm00001d005284_P001 | Maize | cytosol, plasma membrane | 21.09 | 23.68 |
| Zm00001d005283_P001 | Maize | cytosol | 21.09 | 23.68 |
| TraesCS5B01G160800.1 | Wheat | cytosol | 21.88 | 23.33 |
| TraesCS5D01G168500.1 | Wheat | cytosol | 21.88 | 23.33 |
| Os09t0127700-01 | Rice | cytosol, plastid | 21.88 | 23.14 |
| KXG35179 | Sorghum | cytosol | 20.31 | 23.01 |
| TraesCS5A01G163500.1 | Wheat | cytosol | 19.53 | 20.66 |
| HORVU5Hr1G050950.1 | Barley | cytosol | 22.66 | 20.0 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400028927 | EnsemblPlantsGene:PGSC0003DMG401011138 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | PANTHER:PTHR33919 |
| PANTHER:PTHR33919:SF4 | PGSC:PGSC0003DMG401011138 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000295E200 | UniProt:M1ARW8 |
| MapMan:35.2 | : | : | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG401011138]
Coordinates
chr7:+:787036..787659
Molecular Weight (calculated)
13310.2 Da
IEP (calculated)
10.948
GRAVY (calculated)
-0.327
Length
128 amino acids
Sequence
(BLAST)
(BLAST)
001: MVGQENMKSA GVRAAPPPGQ PHTSIRAPGM AAPPPSMGQQ VSMAATAATT GNQTSPKLPS PANMNTEVLN QTRKMPFCPA KAVVGGLAIV MSIAYLTLYS
101: KKKPEASAMD VARVVTGTSN PEHTRPRN
101: KKKPEASAMD VARVVTGTSN PEHTRPRN
1: MAGEEDWRKT ADTTKMSSEG VKAAGVESSK RPPGSNPGGV LHQRRNLPYS YTTMALAGLA ISGAIMYTVM YAKKKPEATA TDVAKAATGT AKPEDTHPRK
Arabidopsis Description
At4g31830 [Source:UniProtKB/TrEMBL;Acc:Q9SZ50]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.