CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EER87703

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G31830.1	EER87703	AT4G25660.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d005284_P001	Maize	cytosol, plasma membrane	82.3	81.58
Zm00001d005283_P001	Maize	cytosol	82.3	81.58
TraesCS5B01G160800.1	Wheat	cytosol	81.42	76.67
TraesCS5D01G168500.1	Wheat	cytosol	81.42	76.67
Os09t0127700-01	Rice	cytosol, plastid	77.88	72.73
HORVU5Hr1G050950.1	Barley	cytosol	82.3	64.14
Solyc08g006800.1.1	Tomato	cytosol	47.79	53.47
PGSC0003DMT400067632	Potato	cytosol	42.48	52.75
TraesCS5A01G163500.1	Wheat	cytosol	55.75	52.07
AT4G31830.1	Thale cress	cytosol	46.02	52.0
CDY23312	Canola	cytosol	45.13	51.0
Bra011302.1-P	Field mustard	cytosol	45.13	51.0
CDY39881	Canola	cytosol	45.13	51.0
CDX75199	Canola	cytosol	45.13	51.0
CDX68792	Canola	cytosol	45.13	51.0
VIT_04s0008g06660.t01	Wine grape	cytosol	46.9	47.32
KRH15642	Soybean	cytosol	30.97	42.68
Bra010218.1-P	Field mustard	cytosol	45.13	41.13
CDY68621	Canola	mitochondrion	25.66	38.67
CDX86832	Canola	cytosol, mitochondrion, plasma membrane, plastid	25.66	38.67
Bra035268.1-P	Field mustard	cytosol, mitochondrion, plasma membrane, plastid	25.66	38.67
CDY62265	Canola	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	24.78	37.33
CDY25265	Canola	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	24.78	37.33
CDY05124	Canola	cytosol, mitochondrion, plasma membrane, plastid	24.78	37.33
CDX90786	Canola	cytosol, mitochondrion, plasma membrane, plastid	24.78	37.33
Bra033165.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	24.78	37.33
Bra000726.1-P	Field mustard	cytosol, mitochondrion, plasma membrane, plastid	24.78	37.33
KRH05375	Soybean	cytosol, endoplasmic reticulum, mitochondrion	33.63	37.25
CDX94242	Canola	cytosol	23.89	36.0
KRH72311	Soybean	endoplasmic reticulum, plastid, vacuole	22.12	33.33
PGSC0003DMT400028927	Potato	plastid	23.01	20.31

Protein Annotations

EnsemblPlants:KXG35179	EnsemblPlantsGene:SORBI_3002G143300	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	PANTHER:PTHR33919
PANTHER:PTHR33919:SF1	ProteinID:KXG35179	ProteinID:KXG35179.1	TMHMM:TMhelix	UniParc:UPI00081ADD12	UniProt:A0A1B6QB73
MapMan:35.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:23996491..23997147

Molecular Weight (calculated)

11961.3 Da

IEP (calculated)

10.277

GRAVY (calculated)

-0.545

Length

113 amino acids

Sequence
(BLAST)

001: MARSGTEEWR RNADTHKMSP EEVRAAGVEA SMRPPGRGPG EVLHQRGRLP YGPGTMALVG FGIVGVIGYL VLYQKARPGT PATEVAKVAV AHGDPAAGRD
101: PVKHPPEGSR EAK

Best Arabidopsis Sequence Match ( AT4G31830.1 )
(BLAST)

1: MAGEEDWRKT ADTTKMSSEG VKAAGVESSK RPPGSNPGGV LHQRRNLPYS YTTMALAGLA ISGAIMYTVM YAKKKPEATA TDVAKAATGT AKPEDTHPRK

Arabidopsis Description

At4g31830 [Source:UniProtKB/TrEMBL;Acc:Q9SZ50]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.