Factsheet for HORVU5Hr1G050950.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU7Hr1G002080.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G31830.1	HORVU7Hr1G002080.2	AT4G25660.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G168500.1	Wheat	cytosol	77.93	94.17
TraesCS5B01G160800.1	Wheat	cytosol	77.24	93.33
Zm00001d005284_P001	Maize	cytosol, plasma membrane	64.83	82.46
Zm00001d005283_P001	Maize	cytosol	64.83	82.46
KXG35179	Sorghum	cytosol	64.14	82.3
Os09t0127700-01	Rice	cytosol, plastid	63.45	76.03
TraesCS5A01G163500.1	Wheat	cytosol	58.62	70.25
PGSC0003DMT400067632	Potato	cytosol	33.1	52.75
Solyc08g006800.1.1	Tomato	cytosol	36.55	52.48
AT4G31830.1	Thale cress	cytosol	35.86	52.0
CDY23312	Canola	cytosol	35.17	51.0
CDX75199	Canola	cytosol	35.17	51.0
CDY39881	Canola	cytosol	35.17	51.0
CDX68792	Canola	cytosol	35.17	51.0
Bra011302.1-P	Field mustard	cytosol	35.17	51.0
KRH15642	Soybean	cytosol	26.9	47.56
VIT_04s0008g06660.t01	Wine grape	cytosol	36.55	47.32
Bra010218.1-P	Field mustard	cytosol	35.86	41.94
KRH05375	Soybean	cytosol, endoplasmic reticulum, mitochondrion	28.97	41.18
CDX86832	Canola	cytosol, mitochondrion, plasma membrane, plastid	20.69	40.0
CDY68621	Canola	mitochondrion	20.69	40.0
Bra035268.1-P	Field mustard	cytosol, mitochondrion, plasma membrane, plastid	20.69	40.0
CDY62265	Canola	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	20.0	38.67
CDY25265	Canola	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	20.0	38.67
CDY05124	Canola	cytosol, mitochondrion, plasma membrane, plastid	20.0	38.67
CDX90786	Canola	cytosol, mitochondrion, plasma membrane, plastid	20.0	38.67
Bra033165.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	20.0	38.67
Bra000726.1-P	Field mustard	cytosol, mitochondrion, plasma membrane, plastid	20.0	38.67
CDX94242	Canola	cytosol	19.31	37.33
KRH72311	Soybean	endoplasmic reticulum, plastid, vacuole	18.62	36.0
PGSC0003DMT400028927	Potato	plastid	20.0	22.66

Protein Annotations

EnsemblPlants:HORVU5Hr1G050950.1	EnsemblPlantsGene:HORVU5Hr1G050950	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	PANTHER:PTHR33919
PANTHER:PTHR33919:SF1	TMHMM:TMhelix	UniParc:UPI000B469609	UniProt:A0A287R6D2	MapMan:35.2	:

Description

No Description!

Coordinates

chrchr5H:-:397742508..397743116

Molecular Weight (calculated)

15247.0 Da

IEP (calculated)

10.255

GRAVY (calculated)

-0.770

Length

145 amino acids

Sequence
(BLAST)

001: DRNTNAAGDG FTQTHHDKRK EGAGMAKSGT EEWRRNADTH KMSPEEVRAA GVEASMRPPG RGGGAGEVLH QRGGRLPFGP GTMALMGFGI VGVIGYLVLY
101: QKARPGTPAT EVAKVAVGHG DPAVGREVQK RQDEAPPAPP SREGK

Best Arabidopsis Sequence Match ( AT4G31830.1 )
(BLAST)

1: MAGEEDWRKT ADTTKMSSEG VKAAGVESSK RPPGSNPGGV LHQRRNLPYS YTTMALAGLA ISGAIMYTVM YAKKKPEATA TDVAKAATGT AKPEDTHPRK

Arabidopsis Description

At4g31830 [Source:UniProtKB/TrEMBL;Acc:Q9SZ50]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.