Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol, plasma membrane, mitochondrion
Predictor Summary:
Predictor Summary:
- extracellular 1
- golgi 1
- plasma membrane 2
- endoplasmic reticulum 1
- vacuole 1
- mitochondrion 3
- cytosol 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY05124 | Canola | cytosol, mitochondrion, plasma membrane, plastid | 98.67 | 98.67 |
| Bra000726.1-P | Field mustard | cytosol, mitochondrion, plasma membrane, plastid | 98.67 | 98.67 |
| CDX94242 | Canola | cytosol | 89.33 | 89.33 |
| CDY25265 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 89.33 | 89.33 |
| CDY62265 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 89.33 | 89.33 |
| CDX86832 | Canola | cytosol, mitochondrion, plasma membrane, plastid | 85.33 | 85.33 |
| CDY68621 | Canola | mitochondrion | 85.33 | 85.33 |
| KRH72311 | Soybean | endoplasmic reticulum, plastid, vacuole | 53.33 | 53.33 |
| CDX68792 | Canola | cytosol | 48.0 | 36.0 |
| CDX75199 | Canola | cytosol | 48.0 | 36.0 |
| CDY23312 | Canola | cytosol | 46.67 | 35.0 |
| CDY39881 | Canola | cytosol | 46.67 | 35.0 |
| VIT_04s0008g06660.t01 | Wine grape | cytosol | 46.67 | 31.25 |
| PGSC0003DMT400028927 | Potato | plastid | 46.67 | 27.34 |
| Zm00001d005284_P001 | Maize | cytosol, plasma membrane | 38.67 | 25.44 |
| Zm00001d005283_P001 | Maize | cytosol | 38.67 | 25.44 |
| KXG35179 | Sorghum | cytosol | 37.33 | 24.78 |
| TraesCS5B01G160800.1 | Wheat | cytosol | 38.67 | 24.17 |
| TraesCS5D01G168500.1 | Wheat | cytosol | 38.67 | 24.17 |
| TraesCS5A01G163500.1 | Wheat | cytosol | 38.67 | 23.97 |
| Os09t0127700-01 | Rice | cytosol, plastid | 37.33 | 23.14 |
| HORVU5Hr1G050950.1 | Barley | cytosol | 38.67 | 20.0 |
Protein Annotations
| EnsemblPlants:CDX90786 | EnsemblPlantsGene:GSBRNA2T00151484001 | GO:A0A078DNE5 | PANTHER:PTHR33919 | PANTHER:PTHR33919:SF4 | ProteinID:CDX90786 |
| ProteinID:CDX90786.1 | TMHMM:TMhelix | UniParc:UPI0004EF4B4C | MapMan:35.2 | : | : |
Description
BnaA03g24660D
Coordinates
chrLK031864:-:519600..519827
Molecular Weight (calculated)
7740.4 Da
IEP (calculated)
9.811
GRAVY (calculated)
0.033
Length
75 amino acids
Sequence
(BLAST)
(BLAST)
1: MAGPDQAAKQ SSEVLCQRRS LGICPVRAAA VGFVIIGGLG YMVLYSKKKP EASAGDVAKV ISGVAATPEN THPRN
1: MAGEEDWRKT ADTTKMSSEG VKAAGVESSK RPPGSNPGGV LHQRRNLPYS YTTMALAGLA ISGAIMYTVM YAKKKPEATA TDVAKAATGT AKPEDTHPRK
Arabidopsis Description
At4g31830 [Source:UniProtKB/TrEMBL;Acc:Q9SZ50]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.