Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- mitochondrion 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX86832 | Canola | cytosol, mitochondrion, plasma membrane, plastid | 97.33 | 97.33 |
| CDY25265 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 96.0 | 96.0 |
| CDY62265 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 96.0 | 96.0 |
| CDX94242 | Canola | cytosol | 93.33 | 93.33 |
| CDY05124 | Canola | cytosol, mitochondrion, plasma membrane, plastid | 86.67 | 86.67 |
| CDX90786 | Canola | cytosol, mitochondrion, plasma membrane, plastid | 85.33 | 85.33 |
| KRH72311 | Soybean | endoplasmic reticulum, plastid, vacuole | 52.0 | 52.0 |
| CDX75199 | Canola | cytosol | 45.33 | 34.0 |
| CDX68792 | Canola | cytosol | 45.33 | 34.0 |
| CDY23312 | Canola | cytosol | 44.0 | 33.0 |
| CDY39881 | Canola | cytosol | 44.0 | 33.0 |
| VIT_04s0008g06660.t01 | Wine grape | cytosol | 44.0 | 29.46 |
| PGSC0003DMT400028927 | Potato | plastid | 49.33 | 28.91 |
| Zm00001d005284_P001 | Maize | cytosol, plasma membrane | 40.0 | 26.32 |
| Zm00001d005283_P001 | Maize | cytosol | 40.0 | 26.32 |
| KXG35179 | Sorghum | cytosol | 38.67 | 25.66 |
| TraesCS5B01G160800.1 | Wheat | cytosol | 40.0 | 25.0 |
| TraesCS5D01G168500.1 | Wheat | cytosol | 40.0 | 25.0 |
| TraesCS5A01G163500.1 | Wheat | cytosol | 38.67 | 23.97 |
| Os09t0127700-01 | Rice | cytosol, plastid | 36.0 | 22.31 |
| HORVU5Hr1G050950.1 | Barley | cytosol | 40.0 | 20.69 |
Protein Annotations
| EnsemblPlants:CDY68621 | EnsemblPlantsGene:GSBRNA2T00076039001 | GO:A0A078JSK1 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PANTHER:PTHR33919 | PANTHER:PTHR33919:SF4 | ProteinID:CDY68621 | ProteinID:CDY68621.1 | TMHMM:TMhelix | UniParc:UPI0004EB4A30 |
| UniProt:A0A078JSK1 | MapMan:35.2 | : | : | : | : |
Description
BnaCnng59810DBnaCnng59810D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JSK1]
Coordinates
chrLK037674:+:534..761
Molecular Weight (calculated)
7712.4 Da
IEP (calculated)
10.465
GRAVY (calculated)
-0.077
Length
75 amino acids
Sequence
(BLAST)
(BLAST)
1: MAGPEQAAKQ SSEVLGQRRA LGMCPVRAAA VGFVIVGGLG YMVLYSKKKP EASAGDVAKV MSGVSGTTES TRPRN
1: MAGEEDWRKT ADTTKMSSEG VKAAGVESSK RPPGSNPGGV LHQRRNLPYS YTTMALAGLA ISGAIMYTVM YAKKKPEATA TDVAKAATGT AKPEDTHPRK
Arabidopsis Description
At4g31830 [Source:UniProtKB/TrEMBL;Acc:Q9SZ50]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.