Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- plastid 1
- extracellular 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Bra010452.1-P | |
| Bra013908.1-P | |
| Bra013910.1-P |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G31830.1 | Bra010452.1-P | AT4G25660.1 | 21798944 |
| AT4G31830.1 | Bra013908.1-P | AT4G25660.1 | 21798944 |
| AT4G31830.1 | Bra013910.1-P | AT4G25660.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY23312 | Canola | cytosol | 75.81 | 94.0 |
| CDY39881 | Canola | cytosol | 75.81 | 94.0 |
| AT4G31830.1 | Thale cress | cytosol | 73.39 | 91.0 |
| Bra011302.1-P | Field mustard | cytosol | 71.77 | 89.0 |
| PGSC0003DMT400067632 | Potato | cytosol | 48.39 | 65.93 |
| Solyc08g006800.1.1 | Tomato | cytosol | 52.42 | 64.36 |
| KRH15642 | Soybean | cytosol | 35.48 | 53.66 |
| VIT_04s0008g06660.t01 | Wine grape | cytosol | 46.77 | 51.79 |
| KRH05375 | Soybean | cytosol, endoplasmic reticulum, mitochondrion | 37.9 | 46.08 |
| KXG35179 | Sorghum | cytosol | 41.13 | 45.13 |
| TraesCS5D01G168500.1 | Wheat | cytosol | 43.55 | 45.0 |
| TraesCS5B01G160800.1 | Wheat | cytosol | 43.55 | 45.0 |
| Zm00001d005284_P001 | Maize | cytosol, plasma membrane | 40.32 | 43.86 |
| Zm00001d005283_P001 | Maize | cytosol | 40.32 | 43.86 |
| Os09t0127700-01 | Rice | cytosol, plastid | 41.13 | 42.15 |
| Bra000726.1-P | Field mustard | cytosol, mitochondrion, plasma membrane, plastid | 25.0 | 41.33 |
| Bra035268.1-P | Field mustard | cytosol, mitochondrion, plasma membrane, plastid | 23.39 | 38.67 |
| Bra033165.1-P | Field mustard | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 23.39 | 38.67 |
| HORVU5Hr1G050950.1 | Barley | cytosol | 41.94 | 35.86 |
| TraesCS5A01G163500.1 | Wheat | cytosol | 29.84 | 30.58 |
Protein Annotations
| EnsemblPlants:Bra010218.1 | EnsemblPlants:Bra010218.1-P | EnsemblPlantsGene:Bra010218 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PANTHER:PTHR33919 | PANTHER:PTHR33919:SF1 | TMHMM:TMhelix | UniParc:UPI0002546B3D | UniProt:M4D169 | MapMan:35.2 |
Description
AT4G31830 (E=4e-047) | unknown protein
Coordinates
chrA08:+:13238736..13239110
Molecular Weight (calculated)
13294.9 Da
IEP (calculated)
7.349
GRAVY (calculated)
-0.312
Length
124 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGENDWRKT ADTTKMSSEG VKAAGVESSK RPPGSNPGGV LHQRRNLPYS YTTMALAGLA ISGAIMYTVM YVKKKPEASA TDVAKAATGT AKPGSDTMIE
101: FTLEEEDEVV TECLLFLLNV KAYK
101: FTLEEEDEVV TECLLFLLNV KAYK
1: MAGEEDWRKT ADTTKMSSEG VKAAGVESSK RPPGSNPGGV LHQRRNLPYS YTTMALAGLA ISGAIMYTVM YAKKKPEATA TDVAKAATGT AKPEDTHPRK
Arabidopsis Description
At4g31830 [Source:UniProtKB/TrEMBL;Acc:Q9SZ50]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.