Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 4
- cytosol 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400042551 | Potato | nucleus | 21.67 | 18.45 |
| PGSC0003DMT400032944 | Potato | mitochondrion | 12.93 | 16.35 |
| PGSC0003DMT400020212 | Potato | cytosol | 23.19 | 15.44 |
| PGSC0003DMT400003908 | Potato | plastid | 22.81 | 12.27 |
| PGSC0003DMT400047266 | Potato | nucleus | 24.71 | 11.95 |
| PGSC0003DMT400014529 | Potato | nucleus | 20.15 | 11.78 |
| PGSC0003DMT400033769 | Potato | mitochondrion | 17.11 | 10.54 |
| PGSC0003DMT400070850 | Potato | cytosol | 19.01 | 9.47 |
| PGSC0003DMT400092826 | Potato | nucleus | 14.83 | 9.18 |
| PGSC0003DMT400022180 | Potato | nucleus | 14.83 | 7.07 |
| PGSC0003DMT400030456 | Potato | mitochondrion, nucleus, plastid | 17.87 | 4.33 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400032356 | EnsemblPlantsGene:PGSC0003DMG400012427 | Gene3D:1.20.1260.60 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015031 |
| InterPro:Ist1 | PANTHER:PTHR12161 | PANTHER:PTHR12161:SF18 | PFAM:PF03398 | PGSC:PGSC0003DMG400012427 | SEG:seg |
| UniParc:UPI0002955C65 | UniProt:M1AXA2 | MapMan:35.2 | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400012427]
Coordinates
chr7:+:53386514..53391185
Molecular Weight (calculated)
30233.0 Da
IEP (calculated)
8.754
GRAVY (calculated)
-0.606
Length
263 amino acids
Sequence
(BLAST)
(BLAST)
001: MLVKKMKAAP AAKTPFLRVS HDRGLSLVKY DDRYLVEQLY RDECRLSAYN QLDNFCDCIS TNLRDISTNS KLSDDVQEAL SSMIFAASRC GELPELHSLR
101: NLFKQQFGQS FDRLNVELLP GNMVNSETKQ YLTHVTKLKE DIKLQIIDEN FSSFKGPSST IDNNSWVESL NCGIYTSMTT GRKKTVNNNN ISNVIPQVKF
201: RRCNEAVIGE NEEQLPQIQP QSPHVHPKLP DYDNLVAKFK DLKGENMYKT STKYRSFSKL MRW
101: NLFKQQFGQS FDRLNVELLP GNMVNSETKQ YLTHVTKLKE DIKLQIIDEN FSSFKGPSST IDNNSWVESL NCGIYTSMTT GRKKTVNNNN ISNVIPQVKF
201: RRCNEAVIGE NEEQLPQIQP QSPHVHPKLP DYDNLVAKFK DLKGENMYKT STKYRSFSKL MRW
001: MVRQSRSDIA QLLSYGRYSE ALPKAKQFYE DERRLSAYDQ VELFCTTILQ NISSLKYENN VDLLPEETKK AMAGIIFAAS RIGELEDLQH IRSFFVQRFG
101: LKFDKECVDL RQGNVVGFEI VKILNTNMRG DEITHIVREL SHKYKTNITT STDSISEDLA SSDDLGIADS DAMKVEKMKR ALRRKKVMKE NSKFLHPNLR
201: ESQGRDRSFR R
101: LKFDKECVDL RQGNVVGFEI VKILNTNMRG DEITHIVREL SHKYKTNITT STDSISEDLA SSDDLGIADS DAMKVEKMKR ALRRKKVMKE NSKFLHPNLR
201: ESQGRDRSFR R
Arabidopsis Description
Regulator of Vps4 activity in the MVB pathway protein [Source:UniProtKB/TrEMBL;Acc:Q4PSP2]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.