Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, nucleus
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- peroxisome 1
- plastid 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc05g053050.1.1 | Tomato | cytosol, nucleus, peroxisome | 71.62 | 71.62 |
| VIT_13s0019g01870.t01 | Wine grape | cytosol | 43.24 | 45.71 |
| TraesCS5B01G495400.1 | Wheat | nucleus | 45.95 | 40.96 |
| GSMUA_Achr6P17910_001 | Banana | nucleus | 40.54 | 38.96 |
| TraesCS5D01G495900.1 | Wheat | cytosol | 44.59 | 37.08 |
| PGSC0003DMT400077975 | Potato | cytosol | 41.89 | 36.47 |
| TraesCS5A01G482300.1 | Wheat | nucleus | 43.24 | 35.96 |
| TraesCS3A01G361000.1 | Wheat | cytosol | 39.19 | 35.8 |
| HORVU3Hr1G086110.1 | Barley | cytosol | 37.84 | 35.0 |
| Os03t0822400-01 | Rice | nucleus | 41.89 | 34.83 |
| TraesCS3B01G393400.1 | Wheat | cytosol | 37.84 | 34.15 |
| TraesCS3D01G354800.1 | Wheat | cytosol | 37.84 | 33.73 |
| GSMUA_Achr2P16400_001 | Banana | cytosol | 39.19 | 33.33 |
| EER93180 | Sorghum | cytosol | 40.54 | 32.26 |
| Zm00001d042902_P001 | Maize | cytosol | 39.19 | 32.22 |
| HORVU5Hr1G113790.1 | Barley | cytosol, nucleus | 47.3 | 31.82 |
| HORVU5Hr1G113780.1 | Barley | cytosol, nucleus | 47.3 | 30.97 |
| Zm00001d012956_P001 | Maize | cytosol | 39.19 | 30.53 |
| Os01t0843700-01 | Rice | cytosol | 37.84 | 30.11 |
| KXG33680 | Sorghum | mitochondrion | 39.19 | 23.97 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400070004 | EnsemblPlantsGene:PGSC0003DMG400027224 | EntrezGene:107062156 | PANTHER:PTHR33142 | PANTHER:PTHR33142:SF15 | PGSC:PGSC0003DMG400027224 |
| RefSeq:XP_015167961.1 | UniParc:UPI000294F2B0 | UniProt:M1CLJ8 | MapMan:13.1.1.3.2 | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400027224]
Coordinates
chr5:-:48323805..48324282
Molecular Weight (calculated)
8650.5 Da
IEP (calculated)
9.553
GRAVY (calculated)
-0.751
Length
74 amino acids
Sequence
(BLAST)
(BLAST)
1: MVKSDYELVE IDEGCNTPRH DKYRILVNSK CPPPTPRKKR IYVKQQSSPP KEGYFQPPDL EILFAIVPRR VTHV
1: MEVVERKTEM AEEGCTTPRS TMYRIPVASV CPPPPRKKLM VVRKRDPPRN GYFQPPDLET LFYAQPRREA CA
Arabidopsis Description
SMR4Cyclin-dependent protein kinase inhibitor SMR4 [Source:UniProtKB/Swiss-Prot;Acc:Q1JPP8]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.