Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- peroxisome 1
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400070004 | Potato | nucleus, peroxisome, plastid | 71.62 | 71.62 |
| VIT_13s0019g01870.t01 | Wine grape | cytosol | 44.59 | 47.14 |
| GSMUA_Achr6P17910_001 | Banana | nucleus | 43.24 | 41.56 |
| TraesCS5B01G495400.1 | Wheat | nucleus | 39.19 | 34.94 |
| GSMUA_Achr2P16400_001 | Banana | cytosol | 40.54 | 34.48 |
| TraesCS5D01G495900.1 | Wheat | cytosol | 40.54 | 33.71 |
| Os03t0822400-01 | Rice | nucleus | 39.19 | 32.58 |
| TraesCS5A01G482300.1 | Wheat | nucleus | 37.84 | 31.46 |
| HORVU3Hr1G086110.1 | Barley | cytosol | 32.43 | 30.0 |
| TraesCS3A01G361000.1 | Wheat | cytosol | 32.43 | 29.63 |
| TraesCS3B01G393400.1 | Wheat | cytosol | 32.43 | 29.27 |
| EER93180 | Sorghum | cytosol | 36.49 | 29.03 |
| Solyc06g076310.1.1 | Tomato | cytosol, nucleus, plastid | 32.43 | 28.92 |
| TraesCS3D01G354800.1 | Wheat | cytosol | 32.43 | 28.92 |
| Zm00001d042902_P001 | Maize | cytosol | 35.14 | 28.89 |
| Zm00001d012956_P001 | Maize | cytosol | 35.14 | 27.37 |
| HORVU5Hr1G113790.1 | Barley | cytosol, nucleus | 40.54 | 27.27 |
| Os01t0843700-01 | Rice | cytosol | 33.78 | 26.88 |
| HORVU5Hr1G113780.1 | Barley | cytosol, nucleus | 40.54 | 26.55 |
| KXG33680 | Sorghum | mitochondrion | 35.14 | 21.49 |
Protein Annotations
| EnsemblPlants:Solyc05g053050.1.1 | EnsemblPlantsGene:Solyc05g053050.1 | PANTHER:PTHR33142 | PANTHER:PTHR33142:SF15 | UniParc:UPI00027660EE | UniProt:K4C1Y5 |
| MapMan:13.1.1.3.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr5:-:63204607..63204831
Molecular Weight (calculated)
8807.7 Da
IEP (calculated)
10.318
GRAVY (calculated)
-1.039
Length
74 amino acids
Sequence
(BLAST)
(BLAST)
1: MVKRDNESME IDEGCKTPRH DKHRIMVNSM FPPPTPRKKR IYVKQQSSPP KEGYFHPPDL EILFTIVSRR ETRV
1: MEVVERKTEM AEEGCTTPRS TMYRIPVASV CPPPPRKKLM VVRKRDPPRN GYFQPPDLET LFYAQPRREA CA
Arabidopsis Description
SMR4Cyclin-dependent protein kinase inhibitor SMR4 [Source:UniProtKB/Swiss-Prot;Acc:Q1JPP8]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.