Subcellular Localization
min:
: max
Winner_takes_all: cytosol, nucleus, plastid
Predictor Summary:
Predictor Summary:
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
- cytosol 1
- nucleus 2
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400077975 | Potato | cytosol | 73.49 | 71.76 |
| KRH15086 | Soybean | cytosol | 39.76 | 48.53 |
| KRH73050 | Soybean | cytosol | 38.55 | 45.71 |
| TraesCS5D01G495900.1 | Wheat | cytosol | 43.37 | 40.45 |
| TraesCS5A01G482300.1 | Wheat | nucleus | 43.37 | 40.45 |
| TraesCS5B01G495400.1 | Wheat | nucleus | 39.76 | 39.76 |
| GSMUA_Achr6P17910_001 | Banana | nucleus | 36.14 | 38.96 |
| HORVU3Hr1G086110.1 | Barley | cytosol | 36.14 | 37.5 |
| TraesCS3A01G361000.1 | Wheat | cytosol | 36.14 | 37.04 |
| TraesCS3B01G393400.1 | Wheat | cytosol | 36.14 | 36.59 |
| TraesCS3D01G354800.1 | Wheat | cytosol | 34.94 | 34.94 |
| Os03t0822400-01 | Rice | nucleus | 36.14 | 33.71 |
| HORVU5Hr1G113790.1 | Barley | cytosol, nucleus | 44.58 | 33.64 |
| Zm00001d042902_P001 | Maize | cytosol | 36.14 | 33.33 |
| GSMUA_Achr2P16400_001 | Banana | cytosol | 34.94 | 33.33 |
| HORVU5Hr1G113780.1 | Barley | cytosol, nucleus | 44.58 | 32.74 |
| Solyc05g053050.1.1 | Tomato | cytosol, nucleus, peroxisome | 28.92 | 32.43 |
| EER93180 | Sorghum | cytosol | 36.14 | 32.26 |
| Os01t0843700-01 | Rice | cytosol | 34.94 | 31.18 |
| Zm00001d012956_P001 | Maize | cytosol | 32.53 | 28.42 |
| KXG33680 | Sorghum | mitochondrion | 34.94 | 23.97 |
Protein Annotations
| EnsemblPlants:Solyc06g076310.1.1 | EnsemblPlantsGene:Solyc06g076310.1 | PANTHER:PTHR33142 | PANTHER:PTHR33142:SF15 | SEG:seg | UniParc:UPI000276710E |
| UniProt:K4C9Z1 | MapMan:13.1.1.3.2 | : | : | : | : |
Description
No Description!
Coordinates
chr6:+:47411974..47412225
Molecular Weight (calculated)
9585.5 Da
IEP (calculated)
4.656
GRAVY (calculated)
-0.812
Length
83 amino acids
Sequence
(BLAST)
(BLAST)
1: MEIKEYEDVT MMEVVEEEGC STPKRDDCQI PAMVVPPPPP RKKRTYDCGG DKRKPPENGY FQAPEIELFF AMQPRCTQRT FAV
1: MEEKNYDDGD TVTVDDDYQM GCTTPTRDDC RIPAYPPCPP PVRRKRSLLG FGKKREPPKK GYFQPPDLDL FFSVVAASQA AT
Arabidopsis Description
SMR5Cyclin-dependent protein kinase inhibitor SMR5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNX4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.