Subcellular Localization
min:
: max
Winner_takes_all: golgi, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- plastid 4
- extracellular 4
- endoplasmic reticulum 3
- vacuole 4
- plasma membrane 3
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g013620.1.1 | Tomato | plasma membrane | 76.81 | 33.12 |
| Solyc01g017090.2.1 | Tomato | plasma membrane | 79.71 | 28.06 |
| Solyc02g011720.1.1 | Tomato | endoplasmic reticulum, extracellular | 43.48 | 25.21 |
| Solyc11g021190.1.1 | Tomato | endoplasmic reticulum, plasma membrane | 66.67 | 21.8 |
| Solyc04g024570.1.1 | Tomato | endoplasmic reticulum | 79.71 | 18.21 |
| CAA33950 | Rice | plasma membrane | 82.61 | 7.77 |
| GRMZM5G894515_P01 | Maize | plastid | 82.61 | 7.72 |
| Solyc05g013110.1.1 | Tomato | vacuole | 8.7 | 6.98 |
| HORVU2Hr1G044830.1 | Barley | endoplasmic reticulum | 0.0 | 0.0 |
| Solyc01g017100.1.1 | Tomato | endoplasmic reticulum, vacuole | 0.0 | 0.0 |
| Solyc02g011710.1.1 | Tomato | endoplasmic reticulum, extracellular | 0.0 | 0.0 |
| Solyc03g061580.1.1 | Tomato | plastid | 0.0 | 0.0 |
| Solyc05g013100.1.1 | Tomato | golgi, mitochondrion, plastid | 0.0 | 0.0 |
| Solyc12g033000.1.1 | Tomato | endoplasmic reticulum | 0.0 | 0.0 |
| Solyc12g033070.1.1 | Tomato | extracellular | 0.0 | 0.0 |
| TraesCS4A01G141100.1 | Wheat | plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Solyc02g032320.1.1 | EnsemblPlantsGene:Solyc02g032320.1 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:ND/Mrp_mem |
| InterPro:Proton_antipo_N | PANTHER:PTHR42829 | PANTHER:PTHR42829:SF3 | PFAM:PF00361 | PFAM:PF00662 | TMHMM:TMhelix |
| UniParc:UPI000276919C | UniProt:K4B5H8 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr2:+:28214317..28214526
Molecular Weight (calculated)
7947.0 Da
IEP (calculated)
4.366
GRAVY (calculated)
1.129
Length
69 amino acids
Sequence
(BLAST)
(BLAST)
1: MLILITTVGI MVLIYSDNYI AHDQGYLRFF AYMSFFSTSM LGLVTSSNLI QIYIFWELIG LCSYLLLGF
1: MYQKHREGIL YMTFAMTGAL AWQVTNPLIK RYSFWFRGGM REGTGLVNKL SLPGSLSLLN VCLLSCFICF LHTTQTTIIE ASLVLFNMLL ACAMIEEH
Arabidopsis Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT1G19397]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.