Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
- cytosol 2
- nucleus 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g043570.1.1 | Tomato | cytosol | 8.4 | 7.52 |
| KRG90688 | Soybean | nucleus | 7.56 | 7.03 |
| Solyc03g042510.1.1 | Tomato | nucleus | 10.08 | 6.22 |
| Solyc01g034190.1.1 | Tomato | cytoskeleton, cytosol, nucleus | 5.04 | 6.19 |
| Solyc03g042500.1.1 | Tomato | mitochondrion | 9.24 | 5.42 |
| Solyc02g065350.2.1 | Tomato | mitochondrion | 12.61 | 4.53 |
| Solyc04g015500.2.1 | Tomato | cytosol | 6.72 | 3.69 |
| Solyc01g015210.1.1 | Tomato | nucleus | 7.56 | 3.17 |
| Solyc11g045450.1.1 | Tomato | cytosol | 7.56 | 3.03 |
| KRH36063 | Soybean | nucleus | 7.56 | 2.85 |
| Solyc08g068540.2.1 | Tomato | nucleus | 10.08 | 2.4 |
| Solyc07g054630.2.1 | Tomato | nucleus | 10.08 | 2.08 |
| Solyc08g029090.2.1 | Tomato | nucleus | 10.08 | 2.05 |
| Solyc03g043580.1.1 | Tomato | cytosol | 5.04 | 1.86 |
| Solyc03g044110.1.1 | Tomato | nucleus | 5.04 | 1.86 |
| Solyc02g021260.1.1 | Tomato | nucleus, plasma membrane | 10.08 | 0.91 |
Protein Annotations
| EnsemblPlants:Solyc05g017730.1.1 | EnsemblPlantsGene:Solyc05g017730.1 | SEG:seg | UniParc:UPI000276702C | UniProt:K4BZ33 | MapMan:35.2 |
Description
No Description!
Coordinates
chr5:+:18214277..18214636
Molecular Weight (calculated)
13562.3 Da
IEP (calculated)
3.139
GRAVY (calculated)
-0.550
Length
119 amino acids
Sequence
(BLAST)
(BLAST)
001: MYDQSARKIE YAIDQDIESD EEEEDIPVAQ ANANVIEEEI PVLQTNSNVI EEHIPINFQA NTNVIEEEEE DISVNLQANA NVIEEEEEDI PVNLQANANV
101: IEEEEEDVSV NYLQTLMLM
101: IEEEEEDVSV NYLQTLMLM
001: MPIFQWLKRC LCGDTNITID QAIALVDEEI ANLRKLERGY QTNIRNAENA RDQTNVQIER DSFNDTIRLL QAECNLINLE IPTLNEEKFA ITRLKSAKHF
101: FGAVSSVNKT RERYHQ
101: FGAVSSVNKT RERYHQ
Arabidopsis Description
CML1Probable calcium-binding protein CML46 [Source:UniProtKB/Swiss-Prot;Acc:Q9LX26]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.