Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400037688 | Potato | nucleus | 57.88 | 45.37 |
| Solyc04g015500.2.1 | Tomato | cytosol | 13.53 | 36.41 |
| KRH46517 | Soybean | nucleus | 14.04 | 32.03 |
| KRG94732 | Soybean | nucleus | 13.01 | 30.4 |
| Solyc01g034190.1.1 | Tomato | cytoskeleton, cytosol, nucleus | 4.97 | 29.9 |
| KRH46518 | Soybean | nucleus | 13.87 | 28.42 |
| KRH54937 | Soybean | nucleus | 14.73 | 28.1 |
| Solyc02g065350.2.1 | Tomato | mitochondrion | 15.92 | 28.1 |
| KRG90691 | Soybean | nucleus | 11.64 | 25.47 |
| KRH06798 | Soybean | cytosol | 15.24 | 24.52 |
| KRG99575 | Soybean | nucleus | 14.21 | 24.13 |
| KRH38154 | Soybean | nucleus | 14.04 | 22.78 |
| KRH18416 | Soybean | nucleus | 11.64 | 22.22 |
| KRG90690 | Soybean | cytosol, mitochondrion, nucleus | 11.3 | 22.15 |
| KRH49477 | Soybean | nucleus | 12.16 | 22.05 |
| Solyc03g042500.1.1 | Tomato | mitochondrion | 7.53 | 21.67 |
| Solyc03g042510.1.1 | Tomato | nucleus | 7.02 | 21.24 |
| Solyc01g015210.1.1 | Tomato | nucleus | 9.76 | 20.07 |
| Solyc03g044110.1.1 | Tomato | nucleus | 10.45 | 18.89 |
| Solyc03g043580.1.1 | Tomato | cytosol | 10.45 | 18.89 |
| KRH36061 | Soybean | golgi, nucleus | 12.33 | 18.6 |
| Solyc03g043570.1.1 | Tomato | cytosol | 3.94 | 17.29 |
| KRH36062 | Soybean | nucleus | 10.62 | 16.89 |
| KRG90687 | Soybean | nucleus | 12.5 | 16.08 |
| Solyc08g068540.2.1 | Tomato | nucleus | 13.7 | 16.03 |
| Solyc11g045450.1.1 | Tomato | cytosol | 8.05 | 15.82 |
| KRG90686 | Soybean | nucleus | 11.64 | 15.81 |
| Solyc07g054630.2.1 | Tomato | nucleus | 15.24 | 15.4 |
| KRH38192 | Soybean | endoplasmic reticulum, golgi | 13.53 | 14.96 |
| VIT_07s0255g00070.t01 | Wine grape | nucleus | 7.88 | 13.14 |
| Solyc05g017730.1.1 | Tomato | cytosol | 2.05 | 10.08 |
| Solyc02g021260.1.1 | Tomato | nucleus, plasma membrane | 16.27 | 7.21 |
Protein Annotations
| Gene3D:2.40.330.10 | MapMan:35.1 | InterPro:B3_DNA-bd | InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR003340 | InterPro:IPR015300 | UniProt:K4CJX2 | PFAM:PF02362 | PFscan:PS50863 |
| PANTHER:PTHR31391 | PANTHER:PTHR31391:SF45 | SMART:SM01019 | SUPFAM:SSF101936 | EnsemblPlantsGene:Solyc08g029090.2 | EnsemblPlants:Solyc08g029090.2.1 |
| UniParc:UPI000276BE8D | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr8:-:38233951..38236659
Molecular Weight (calculated)
66131.2 Da
IEP (calculated)
9.294
GRAVY (calculated)
-0.792
Length
584 amino acids
Sequence
(BLAST)
(BLAST)
001: MPPQFFKIIL SPHASKLNIP DEFVIKYGAD LRDVVFLEVP TGAIWKVELL QNSNGTKYLN NGWNQFKEYY SIAIGYFLLF QYNGNSHFSV CIFDLSASEI
101: EYLSGPNEHE PPVSRPNCLA ERHREKPDVG EDLTYATQKR KKSKRNGHSN EVVDPSTSKV TTTNQHRTVD CRYPLRSKQR KDVKIEKGDV EEGHCNEALD
201: PSTSKVHSKK RTAASLDASN CRYPLRSKQL KEVKVVKGDV EDHCNKIHLV ADPSATKMTT TVRHHEKKTS ASFDTSHCRY PLRNKQLKEV KPGKTNAEKD
301: LLYVAQKAKR KKANNVKLEK GDAEERSKVG DPSASTTTNQ HNEKKTTTSL DASHCRCPLR SKQHKEVKLE QWEAGGNMHN KTPVADSPYC RSQNPSLPAS
401: SPSCQPVRVK LEKPDNLFCA AEKVKGRETN NVKLDTGDLE GNLVAASYKG KYSTASEMTV LGKKKMLPSE TQNRDMYFNP HFTVSMLPAY VSRNFQLEIP
501: ADFFKKRVNE EETIVNLRVS NGRSWRAKLF DIQSNCPKME SSGWRDFVID NNLKEHDTCV FELNDGIEPM LLDVTIFRAT TPVS
101: EYLSGPNEHE PPVSRPNCLA ERHREKPDVG EDLTYATQKR KKSKRNGHSN EVVDPSTSKV TTTNQHRTVD CRYPLRSKQR KDVKIEKGDV EEGHCNEALD
201: PSTSKVHSKK RTAASLDASN CRYPLRSKQL KEVKVVKGDV EDHCNKIHLV ADPSATKMTT TVRHHEKKTS ASFDTSHCRY PLRNKQLKEV KPGKTNAEKD
301: LLYVAQKAKR KKANNVKLEK GDAEERSKVG DPSASTTTNQ HNEKKTTTSL DASHCRCPLR SKQHKEVKLE QWEAGGNMHN KTPVADSPYC RSQNPSLPAS
401: SPSCQPVRVK LEKPDNLFCA AEKVKGRETN NVKLDTGDLE GNLVAASYKG KYSTASEMTV LGKKKMLPSE TQNRDMYFNP HFTVSMLPAY VSRNFQLEIP
501: ADFFKKRVNE EETIVNLRVS NGRSWRAKLF DIQSNCPKME SSGWRDFVID NNLKEHDTCV FELNDGIEPM LLDVTIFRAT TPVS
001: MVTTQNTKAR VTSVSHRRSQ QDPESPVKKF FKLVLPSTMK DKMMKIPPRF VKLQGSKLSE VVTLETPAGF KRSIKLKRIG EEIWFHEGWS EFAEAHSIEE
101: GHFLLFEYKE NSSFRVIIFN VSACETKYPL DAVHIIDSDD DIIDITGKEF VGTQGTRKNN QSVNGGDTEH KSKKRSRDIE LDKILHDLDV MNPMHVLKEE
201: EEDKRVFRG
101: GHFLLFEYKE NSSFRVIIFN VSACETKYPL DAVHIIDSDD DIIDITGKEF VGTQGTRKNN QSVNGGDTEH KSKKRSRDIE LDKILHDLDV MNPMHVLKEE
201: EEDKRVFRG
Arabidopsis Description
B3 domain-containing protein At3g18960 [Source:UniProtKB/Swiss-Prot;Acc:Q84R27]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.