Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG94732 | Soybean | nucleus | 42.81 | 52.4 |
| KRG99575 | Soybean | nucleus | 48.04 | 42.73 |
| KRH06798 | Soybean | cytosol | 49.02 | 41.32 |
| KRH46517 | Soybean | nucleus | 28.1 | 33.59 |
| KRH46518 | Soybean | nucleus | 30.07 | 32.28 |
| KRG90691 | Soybean | nucleus | 28.1 | 32.21 |
| KRH38154 | Soybean | nucleus | 34.97 | 29.72 |
| KRH18416 | Soybean | nucleus | 28.1 | 28.1 |
| Solyc01g034190.1.1 | Tomato | cytoskeleton, cytosol, nucleus | 8.5 | 26.8 |
| KRH49477 | Soybean | nucleus | 26.14 | 24.84 |
| KRG90690 | Soybean | cytosol, mitochondrion, nucleus | 23.53 | 24.16 |
| KRH36062 | Soybean | nucleus | 27.45 | 22.89 |
| Solyc02g065350.2.1 | Tomato | mitochondrion | 24.51 | 22.66 |
| PGSC0003DMT400007199 | Potato | nucleus | 24.51 | 22.52 |
| KRH24554 | Soybean | nucleus | 31.7 | 22.0 |
| KRH36061 | Soybean | golgi, nucleus | 27.45 | 21.71 |
| Solyc04g015500.2.1 | Tomato | cytosol | 15.36 | 21.66 |
| KRH29559 | Soybean | nucleus | 30.39 | 21.58 |
| Solyc03g042510.1.1 | Tomato | nucleus | 13.4 | 21.24 |
| KRG90686 | Soybean | nucleus | 29.41 | 20.93 |
| KRG89212 | Soybean | nucleus | 29.41 | 20.69 |
| PGSC0003DMT400070034 | Potato | cytoskeleton, cytosol, nucleus | 15.36 | 20.61 |
| PGSC0003DMT400043852 | Potato | nucleus | 23.86 | 20.22 |
| Solyc03g044110.1.1 | Tomato | nucleus | 21.24 | 20.12 |
| Solyc01g015210.1.1 | Tomato | nucleus | 18.3 | 19.72 |
| Solyc03g043580.1.1 | Tomato | cytosol | 20.59 | 19.5 |
| PGSC0003DMT400007200 | Potato | cytosol | 20.59 | 19.21 |
| KRG90687 | Soybean | nucleus | 28.43 | 19.16 |
| PGSC0003DMT400091092 | Potato | nucleus | 18.63 | 19.06 |
| PGSC0003DMT400096938 | Potato | nucleus | 11.44 | 19.02 |
| KRH49567 | Soybean | mitochondrion, nucleus | 29.09 | 19.02 |
| KRH38192 | Soybean | endoplasmic reticulum, golgi | 32.35 | 18.75 |
| Solyc03g042500.1.1 | Tomato | mitochondrion | 11.76 | 17.73 |
| Solyc11g045450.1.1 | Tomato | cytosol | 16.34 | 16.84 |
| KRG90688 | Soybean | nucleus | 6.54 | 15.62 |
| Solyc03g043570.1.1 | Tomato | cytosol | 6.54 | 15.04 |
| Solyc08g029090.2.1 | Tomato | nucleus | 28.1 | 14.73 |
| PGSC0003DMT400085817 | Potato | nucleus | 24.51 | 14.4 |
| KRH36063 | Soybean | nucleus | 14.38 | 13.92 |
| VIT_07s0255g00070.t01 | Wine grape | nucleus | 14.38 | 12.57 |
| PGSC0003DMT400037688 | Potato | nucleus | 27.78 | 11.41 |
| Solyc02g021260.1.1 | Tomato | nucleus, plasma membrane | 19.61 | 4.56 |
Protein Annotations
| Gene3D:2.40.330.10 | MapMan:35.1 | UniProt:A0A0R0JQR6 | EMBL:ACUP02003621 | InterPro:B3_DNA-bd | InterPro:DNA-bd_pseudobarrel_sf |
| EnsemblPlantsGene:GLYMA_06G220000 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003340 | InterPro:IPR015300 |
| EnsemblPlants:KRH54937 | ProteinID:KRH54937 | ProteinID:KRH54937.1 | PFAM:PF02362 | PFscan:PS50863 | PANTHER:PTHR31920 |
| PANTHER:PTHR31920:SF26 | SMART:SM01019 | SUPFAM:SSF101936 | UniParc:UPI0006EE0A7F | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr6:+:25283132..25285504
Molecular Weight (calculated)
35511.8 Da
IEP (calculated)
10.343
GRAVY (calculated)
-0.605
Length
306 amino acids
Sequence
(BLAST)
(BLAST)
001: MHFFRIIIAP SLQEGKLMLP NKFVEKYGEG LPNTLFLKAP NGAEWKLTLE KRDDKMWFQK GWREFAKHHS LDHGHLLLFR YQRTSHFQVH IFDGSGLEIE
101: YPLGKVEGKM TSNYQKNKRP NGEKLEYEFL QPCMGSRKCV KVDNTMKPKL GCSACASYRQ KGQRKTKMTT TEHVTAFDRA SYFRPCNPSF LVVIYPSNAR
201: SRGPLNFPSK FCKKHIDLRK NRGDINLEVL NGRVWHARYR IRTAETRRRF ELSSGWKTFA EDNNLKVGDV CTFELIPATK LTFQVHIFRV SANSNCSTSQ
301: GSIDIF
101: YPLGKVEGKM TSNYQKNKRP NGEKLEYEFL QPCMGSRKCV KVDNTMKPKL GCSACASYRQ KGQRKTKMTT TEHVTAFDRA SYFRPCNPSF LVVIYPSNAR
201: SRGPLNFPSK FCKKHIDLRK NRGDINLEVL NGRVWHARYR IRTAETRRRF ELSSGWKTFA EDNNLKVGDV CTFELIPATK LTFQVHIFRV SANSNCSTSQ
301: GSIDIF
001: MPRPFFHKLI FSSTIQEKRL RVPDKFVSKF KDELSVAVAL TVPDGHVWRV GLRKADNKIW FQDGWQEFVD RYSIRIGYLL IFRYEGNSAF SVYIFNLSHS
101: EINYHSTGLM DSAHNHFKRA RLFEDLEDED AEVIFPSSVY PSPLPESTVP ANKGYASSAI QTLFTGPVKA EEPTPTPKIP KKRGRKKKNA DPEEINSSAP
201: RDDDPENRSK FYESASARKR TVTAEERERA INAAKTFEPT NPFFRVVLRP SYLYRGCIMY LPSGFAEKYL SGISGFIKVQ LAEKQWPVRC LYKAGRAKFS
301: QGWYEFTLEN NLGEGDVCVF ELLRTRDFVL KVTAFRVNEY V
101: EINYHSTGLM DSAHNHFKRA RLFEDLEDED AEVIFPSSVY PSPLPESTVP ANKGYASSAI QTLFTGPVKA EEPTPTPKIP KKRGRKKKNA DPEEINSSAP
201: RDDDPENRSK FYESASARKR TVTAEERERA INAAKTFEPT NPFFRVVLRP SYLYRGCIMY LPSGFAEKYL SGISGFIKVQ LAEKQWPVRC LYKAGRAKFS
301: QGWYEFTLEN NLGEGDVCVF ELLRTRDFVL KVTAFRVNEY V
Arabidopsis Description
VRN1AP2/B3-like transcriptional factor family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQ83]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.