Skip to main content
crop-pal logo
Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 3
  • mitochondrion 2
  • cytosol 2
  • nucleus 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc01g015210.1.1 Tomato nucleus 48.17 55.63
PGSC0003DMT400091092 Potato nucleus 40.24 44.15
PGSC0003DMT400096938 Potato nucleus 19.51 34.78
PGSC0003DMT400007199 Potato nucleus 27.13 26.73
PGSC0003DMT400043852 Potato nucleus 27.74 25.21
KRH46517 Soybean nucleus 18.6 23.83
KRG94732 Soybean nucleus 16.77 22.0
KRG90691 Soybean nucleus 17.38 21.35
KRH54937 Soybean nucleus 19.21 20.59
KRH46518 Soybean nucleus 17.38 20.0
KRG90690 Soybean cytosol, mitochondrion, nucleus 17.99 19.8
PGSC0003DMT400070034 Potato cytoskeleton, cytosol, nucleus 13.72 19.74
KRG99575 Soybean nucleus 19.82 18.9
KRH38154 Soybean nucleus 20.43 18.61
KRH18416 Soybean nucleus 16.46 17.65
KRH06798 Soybean cytosol 19.51 17.63
KRH49477 Soybean nucleus 16.16 16.46
PGSC0003DMT400085817 Potato nucleus 25.61 16.12
KRH36062 Soybean nucleus 17.68 15.8
KRH36061 Soybean golgi, nucleus 17.07 14.47
KRH38192 Soybean endoplasmic reticulum, golgi 21.65 13.45
KRG90686 Soybean nucleus 17.38 13.26
KRG90687 Soybean nucleus 18.29 13.22
VIT_07s0255g00070.t01 Wine grape nucleus 12.5 11.71
PGSC0003DMT400037688 Potato nucleus 19.51 8.59
PGSC0003DMT400047299 Potato nucleus 13.41 8.29
Protein Annotations
Gene3D:2.40.330.10MapMan:35.2InterPro:B3_DNA-bdInterPro:DNA-bd_pseudobarrel_sfGO:GO:0003674GO:GO:0003676
GO:GO:0003677GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634
GO:GO:0006139GO:GO:0006351GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987InterPro:IPR003340InterPro:IPR015300UniProt:M0ZSN1PFAM:PF02362EnsemblPlantsGene:PGSC0003DMG400002785
PGSC:PGSC0003DMG400002785EnsemblPlants:PGSC0003DMT400007200PFscan:PS50863PANTHER:PTHR31920PANTHER:PTHR31920:SF26SMART:SM01019
SUPFAM:SSF101936UniParc:UPI000296505BSEG:seg:::
Description
Sulfotransferase [Source:PGSC_GENE;Acc:PGSC0003DMG400002785]
Coordinates
chr2:+:24354548..24356312
Molecular Weight (calculated)
37581.2 Da
IEP (calculated)
4.555
GRAVY (calculated)
-0.536
Length
328 amino acids
Sequence
(BLAST)
001: MVNKFHGSSF RNSSPNNPKF IQIIASTDDL CRLRIPVVFA ERHCKNMLNP VFLEAPHGKA WEVEVENSQD QIWLAKGWKD FCGYYSISIR SLLVFTYNPR
101: SHFDVAIYDH SKTEIEYPID QEIESDEEEE DIPVLQANAN VIEEDIPVNL QTNANVIEEE EEDLPVNLQT NANVIEQEIS EGYEEHDQRN NPTLVPVNQE
201: DGEANSRSGE VGPKNSSRYS FVNLNGDNPY FEMVIKKAHA TYMTIPMRFA QSTDIINMKN MRLVNEEGVE WGVEIEYNRS MVIIKGGWTA FRKDNKIANG
301: ETCRFKLIRG HIANVLQVQK IPTPLSLQ
Best Arabidopsis Sequence Match ( AT3G18990.1 )
(BLAST)
001: MPRPFFHKLI FSSTIQEKRL RVPDKFVSKF KDELSVAVAL TVPDGHVWRV GLRKADNKIW FQDGWQEFVD RYSIRIGYLL IFRYEGNSAF SVYIFNLSHS
101: EINYHSTGLM DSAHNHFKRA RLFEDLEDED AEVIFPSSVY PSPLPESTVP ANKGYASSAI QTLFTGPVKA EEPTPTPKIP KKRGRKKKNA DPEEINSSAP
201: RDDDPENRSK FYESASARKR TVTAEERERA INAAKTFEPT NPFFRVVLRP SYLYRGCIMY LPSGFAEKYL SGISGFIKVQ LAEKQWPVRC LYKAGRAKFS
301: QGWYEFTLEN NLGEGDVCVF ELLRTRDFVL KVTAFRVNEY V
Arabidopsis Description
VRN1AP2/B3-like transcriptional factor family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQ83]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.