CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, nucleus

Predictor Summary:

plastid 1
mitochondrion 2
nucleus 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, nucleus
Any Predictor:	golgi, mitochondrion, nucleus
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG90691	Soybean	nucleus	30.23	43.82
KRH36062	Soybean	nucleus	35.4	37.33
KRG90686	Soybean	nucleus	36.69	33.02
KRG90687	Soybean	nucleus	36.69	31.28
KRH46517	Soybean	nucleus	20.67	31.25
KRG94732	Soybean	nucleus	19.9	30.8
KRG90690	Soybean	cytosol, mitochondrion, nucleus	22.74	29.53
Solyc01g034190.1.1	Tomato	cytoskeleton, cytosol, nucleus	7.24	28.87
KRH46518	Soybean	nucleus	20.67	28.07
KRH54937	Soybean	nucleus	21.71	27.45
KRH18416	Soybean	nucleus	20.41	25.82
KRG99575	Soybean	nucleus	22.74	25.58
KRH38154	Soybean	nucleus	23.77	25.56
KRH06798	Soybean	cytosol	23.77	25.34
Solyc02g065350.2.1	Tomato	mitochondrion	18.6	21.75
KRH49477	Soybean	nucleus	17.31	20.81
PGSC0003DMT400007199	Potato	nucleus	17.83	20.72
KRH38192	Soybean	endoplasmic reticulum, golgi	28.17	20.64
PGSC0003DMT400096938	Potato	nucleus	9.3	19.57
PGSC0003DMT400043852	Potato	nucleus	17.57	18.84
Solyc03g042510.1.1	Tomato	nucleus	9.3	18.65
Solyc03g044110.1.1	Tomato	nucleus	15.5	18.58
Solyc04g015500.2.1	Tomato	cytosol	10.34	18.43
PGSC0003DMT400070034	Potato	cytoskeleton, cytosol, nucleus	10.85	18.42
Solyc03g042500.1.1	Tomato	mitochondrion	9.56	18.23
KRH24554	Soybean	nucleus	20.67	18.14
Solyc03g043580.1.1	Tomato	cytosol	14.99	17.96
KRG89212	Soybean	nucleus	20.16	17.93
KRH29559	Soybean	nucleus	19.64	17.63
Solyc01g015210.1.1	Tomato	nucleus	12.92	17.61
PGSC0003DMT400007200	Potato	cytosol	14.47	17.07
Solyc11g045450.1.1	Tomato	cytosol	12.92	16.84
PGSC0003DMT400091092	Potato	nucleus	12.92	16.72
KRH49567	Soybean	mitochondrion, nucleus	20.16	16.67
PGSC0003DMT400085817	Potato	nucleus	21.45	15.93
KRG90688	Soybean	nucleus	5.17	15.62
Solyc03g043570.1.1	Tomato	cytosol	5.17	15.04
KRH36063	Soybean	nucleus	10.85	13.29
VIT_07s0255g00070.t01	Wine grape	nucleus	11.63	12.86
Solyc08g029090.2.1	Tomato	nucleus	18.6	12.33
PGSC0003DMT400037688	Potato	nucleus	17.57	9.13
Solyc02g021260.1.1	Tomato	nucleus, plasma membrane	19.9	5.85

Protein Annotations

Gene3D:2.40.330.10	MapMan:35.1	UniProt:A0A0R0I071	EMBL:ACUP02006718	InterPro:B3_DNA-bd	InterPro:DNA-bd_pseudobarrel_sf
EnsemblPlantsGene:GLYMA_10G281100	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003340	InterPro:IPR015300
EnsemblPlants:KRH36061	ProteinID:KRH36061	ProteinID:KRH36061.1	PFAM:PF02362	PFscan:PS50863	PANTHER:PTHR31920
PANTHER:PTHR31920:SF26	SMART:SM01019	SUPFAM:SSF101936	UniParc:UPI0006EDD5E5	:	:

Description

hypothetical protein

Coordinates

chr10:+:50240906..50243956

Molecular Weight (calculated)

45730.3 Da

IEP (calculated)

7.562

GRAVY (calculated)

-0.611

Length

387 amino acids

Sequence
(BLAST)

001: PILFFKVILK TNLERLKIPN KFTSKYIWSL YGNEWKVNWT KQNGEVWFEK GWKEFVEHYS LDQGRLIFFK YEGTSQIDVL ILDQSALEID YPCDTCDEND
101: NLDHTHEAPD IIFGEWPYQK AGQMTGGRRV MYANRRFSKS KAIQNEELLQ NTESSTALER ANYFHSENPF FIREMHKSYI KYHILAMPGN FITEDQQKEN
201: DHVFLWISEE RTWNVKFYPN RCSGQIILGA GWMEFLKDNN LKIGDLCVFE QIKKPGISFR VVIFRDREQS THVDGVNQSK QTGLQNNSKF HRCNNEMLEN
301: DFTLSVKPNQ NYMSIPIEFA RNHGMENITK VILRVGNRSW PVKLNYYSKH NYCRLTSGWS EFMSQCKLKS GDVCHFELID KGKFVFE

Best Arabidopsis Sequence Match ( AT4G00260.1 )
(BLAST)

001: MAHQHFFKPL LPGFHASLTI PVAFFLKYIE GRYEQKTAKL RSDASKRTWE VKIDGQRLTD GWKEFAVSHD LRIGDIVVFR QESDLAFHVT LLGPSCCGIQ
101: YGSCSVEKNN LGDEKKKVKE NPNGEAESSS RDPSCFVANV APSSLRYDLM RFPRGFVRDN GVVGSGEIVL MNEKGRSWNF NLRQKPSNGT VYVRGGWVSF
201: CDANGLKAGD NYTFKLIKRA GTLVLRLLPN EPKEEANEVS LPEEPESDAE RNLEKIQRKE KVKKNVTREA ESSSQDPSCF VANVSPSSLR YDTLYLPKRF
301: MRENGVDKRC GEMILINEKG KSWTLDLKVK KSSGTSLIKR GWRSFCSANG LRAGSIITLK LIKKRATLVL RLIPNEPEEA NEVVSLSTEQ ESDEESIHDE
401: KISRRKSLLS ENRFVTLTLT PYTIQSSLLN ENLLCESMFQ RLPVPFTRMN GINEETKMTL LDKHGVKWLT TLRFEDDKRK RLRMVGGWQG FIQANDVKAN
501: ESIMLELIWE EETSCVLKFC SKVKLEIK

Arabidopsis Description

REM15.15Putative B3 domain-containing protein REM15 [Source:UniProtKB/Swiss-Prot;Acc:O23076]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.