CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	plastid
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH36063	Soybean	nucleus	41.41	16.77
KRG94732	Soybean	nucleus	17.97	9.2
KRG90691	Soybean	nucleus	17.97	8.61
KRH46517	Soybean	nucleus	16.41	8.2
KRH46518	Soybean	nucleus	17.97	8.07
Solyc05g017730.1.1	Tomato	cytosol	7.03	7.56
KRH49477	Soybean	nucleus	17.19	6.83
KRG90690	Soybean	cytosol, mitochondrion, nucleus	15.62	6.71
KRH38154	Soybean	nucleus	18.75	6.67
KRH24554	Soybean	nucleus	22.66	6.58
KRH54937	Soybean	nucleus	15.62	6.54
KRH29559	Soybean	nucleus	21.88	6.5
KRH36062	Soybean	nucleus	17.97	6.27
KRG89212	Soybean	nucleus	21.09	6.21
KRG90686	Soybean	nucleus	19.53	5.81
KRH06798	Soybean	cytosol	16.41	5.79
KRH49567	Soybean	mitochondrion, nucleus	21.09	5.77
KRH18416	Soybean	nucleus	13.28	5.56
KRG90687	Soybean	nucleus	18.75	5.29
KRG99575	Soybean	nucleus	14.06	5.23
KRH36061	Soybean	golgi, nucleus	15.62	5.17
KRH38192	Soybean	endoplasmic reticulum, golgi	17.19	4.17

Protein Annotations

Gene3D:2.40.330.10	MapMan:35.2	EMBL:ACUP02012633	InterPro:B3_DNA-bd	InterPro:DNA-bd_pseudobarrel_sf	EnsemblPlantsGene:GLYMA_20G108100
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003340	InterPro:IPR015300	UniProt:K7N2T4
EnsemblPlants:KRG90688	ProteinID:KRG90688	ProteinID:KRG90688.1	PFAM:PF02362	PFscan:PS50863	PANTHER:PTHR31920
PANTHER:PTHR31920:SF26	SUPFAM:SSF101936	UniParc:UPI0002955A05	:	:	:

Description

hypothetical protein

Coordinates

chr20:-:35056566..35057342

Molecular Weight (calculated)

14726.6 Da

IEP (calculated)

9.220

GRAVY (calculated)

-0.608

Length

128 amino acids

Sequence
(BLAST)

001: MPIGDAQNQR LLEVSCYKKI LKAMPGNFIT EEQQKEDDSV TLWTSEDRTW HVNFYLNRSS KQIILGAGWM DAVKNNNLKI GNVCIFEQSK KPGISFRVVN
101: FHDREESNPS KFPGNLKIGE RSWPVRLA

Best Arabidopsis Sequence Match ( AT2G24690.2 )
(BLAST)

001: MANSLILGSP INPEGEMMIQ FSNNHDNNIE FQRRKKMKKN NPETETDSSS DLSCFVAQTG ALLHLPQGFT SSNGSNRECR KSPRPIISSY SSSEKQFVTF
101: TLAPVDGRHC RLRLPMQFTR ENGINKPGKI YLVGKDGSKW LANLLLENNR GRMTLGDGWK SFVKANGLKT GDTYTFKLLW EDTTPVLSLC FEEYNTDTRV
201: GEESSKESLP AEPSSQEKIV KDDNNKDESS TWKREGNHLR CKDSTSPSQN CTLTVTITPD SLEHGRLRLP LQFMTENSMN KPGEITLLGT DGAKWMASLL
301: LEKKGRMSLG KGWKDFAKAN GLKTGDSITL EPIWEDRTPV LSIKSSSGKG QSEFSKESLS IKPSSGNMTK KVENNREASR KYPPRSRESS SAIQNQFMAL
401: TPLRDIVSQV AHDLSIGEVI NFRHKGDNML RVSDLGSNCC GVQDLLAPSS NYDHDNISNI SMKINPHIRK EAVTFSSYDG YAHDNFEPPS KKKVKKNNPE
501: MEADYLSDHS CFVSHVTTSS LHTNALSLEV KESLPIEPSI KPNISEDDNN KEEDIIEENS SFEREKNHWI CIDSISSSQN RFLTLTITPD SLKHGRLRLP
601: LQFMIENSMN KPGEITVLGK DGAKWLVSLL LERRGRMSLG KGWKDFAKAN GLKTGDSITL ESVWEGASPV LKLLRIESSS FRGQSEFSKE SHFTDASSGQ
701: ETREAEKNRE ESSSLWELEK RTYCPRKRDS SSDVKNRFLT LTLAPEDVKD GNLHLPCQFM RINGINKPGQ ITLLGRGGMK WFAYLLSGDG TVVVGNGWKG
801: FCEANGVMLG ETFVLEFIPK DDTNHVFKFY TK

Arabidopsis Description

Transcriptional factor B3 family protein [Source:TAIR;Acc:AT2G24690]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.