Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 2
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH06798 | Soybean | cytosol | 72.4 | 49.86 |
| KRG99575 | Soybean | nucleus | 61.6 | 44.77 |
| KRH54937 | Soybean | nucleus | 52.4 | 42.81 |
| KRH46517 | Soybean | nucleus | 36.4 | 35.55 |
| KRG90691 | Soybean | nucleus | 35.6 | 33.33 |
| Solyc01g034190.1.1 | Tomato | cytoskeleton, cytosol, nucleus | 11.6 | 29.9 |
| KRH46518 | Soybean | nucleus | 32.4 | 28.42 |
| KRG90690 | Soybean | cytosol, mitochondrion, nucleus | 33.2 | 27.85 |
| KRH38154 | Soybean | nucleus | 36.8 | 25.56 |
| KRH18416 | Soybean | nucleus | 30.8 | 25.16 |
| KRH49477 | Soybean | nucleus | 28.8 | 22.36 |
| Solyc02g065350.2.1 | Tomato | mitochondrion | 29.6 | 22.36 |
| PGSC0003DMT400007199 | Potato | nucleus | 29.6 | 22.22 |
| Solyc03g042500.1.1 | Tomato | mitochondrion | 18.0 | 22.17 |
| Solyc04g015500.2.1 | Tomato | cytosol | 18.8 | 21.66 |
| PGSC0003DMT400043852 | Potato | nucleus | 30.8 | 21.33 |
| PGSC0003DMT400070034 | Potato | cytoskeleton, cytosol, nucleus | 19.2 | 21.05 |
| Solyc03g042510.1.1 | Tomato | nucleus | 15.6 | 20.21 |
| PGSC0003DMT400096938 | Potato | nucleus | 14.8 | 20.11 |
| KRH36061 | Soybean | golgi, nucleus | 30.8 | 19.9 |
| KRH36062 | Soybean | nucleus | 27.6 | 18.8 |
| KRG90686 | Soybean | nucleus | 32.0 | 18.6 |
| KRG90688 | Soybean | nucleus | 9.2 | 17.97 |
| KRG90687 | Soybean | nucleus | 32.4 | 17.84 |
| KRH38192 | Soybean | endoplasmic reticulum, golgi | 37.6 | 17.8 |
| Solyc03g043570.1.1 | Tomato | cytosol | 9.2 | 17.29 |
| Solyc01g015210.1.1 | Tomato | nucleus | 19.6 | 17.25 |
| Solyc03g044110.1.1 | Tomato | nucleus | 22.0 | 17.03 |
| PGSC0003DMT400007200 | Potato | cytosol | 22.0 | 16.77 |
| KRH29559 | Soybean | nucleus | 28.8 | 16.71 |
| KRH24554 | Soybean | nucleus | 28.4 | 16.1 |
| Solyc03g043580.1.1 | Tomato | cytosol | 20.8 | 16.1 |
| PGSC0003DMT400091092 | Potato | nucleus | 18.8 | 15.72 |
| KRG89212 | Soybean | nucleus | 27.2 | 15.63 |
| KRH36063 | Soybean | nucleus | 19.2 | 15.19 |
| KRH49567 | Soybean | mitochondrion, nucleus | 27.6 | 14.74 |
| Solyc11g045450.1.1 | Tomato | cytosol | 16.8 | 14.14 |
| PGSC0003DMT400085817 | Potato | nucleus | 28.0 | 13.44 |
| Solyc08g029090.2.1 | Tomato | nucleus | 30.4 | 13.01 |
| VIT_07s0255g00070.t01 | Wine grape | nucleus | 15.6 | 11.14 |
| PGSC0003DMT400037688 | Potato | nucleus | 31.2 | 10.47 |
| Solyc02g021260.1.1 | Tomato | nucleus, plasma membrane | 22.8 | 4.33 |
Protein Annotations
| Gene3D:2.40.330.10 | MapMan:35.1 | UniProt:A0A0R0EK95 | EMBL:ACUP02012020 | InterPro:B3_DNA-bd | InterPro:DNA-bd_pseudobarrel_sf |
| EnsemblPlantsGene:GLYMA_19G105300 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003340 | InterPro:IPR015300 |
| EnsemblPlants:KRG94732 | ProteinID:KRG94732 | ProteinID:KRG94732.1 | PFAM:PF02362 | PFscan:PS50863 | PANTHER:PTHR31920 |
| PANTHER:PTHR31920:SF26 | SMART:SM01019 | SUPFAM:SSF101936 | UniParc:UPI0006ED5A1B | : | : |
Description
hypothetical protein
Coordinates
chr19:-:35504826..35506609
Molecular Weight (calculated)
29182.2 Da
IEP (calculated)
10.649
GRAVY (calculated)
-0.680
Length
250 amino acids
Sequence
(BLAST)
(BLAST)
001: MASTFPHQLQ VKPIHFFKII TAQNLQDGKL MIPNKYVDKY GEGLPNSLFL KTPNGTEWNF NLKKRDGKIW FQKGWKEFAE YHSLAHGHLL VFRRHRTSHF
101: QVHIFDLSAL EIHYPSKGRE GKMSPNHQGN NPRNEENLEY HKPGQKRKDN TSLKFLQPYI SNENLLTKFC RRHFGLLNKK RHINLQVLNW RIWPGKLTSG
201: WKAFVKDNNL KVGNVCTFEL IDGTKLTFLV HIFKGTKSSN CSTSQGRIDV
101: QVHIFDLSAL EIHYPSKGRE GKMSPNHQGN NPRNEENLEY HKPGQKRKDN TSLKFLQPYI SNENLLTKFC RRHFGLLNKK RHINLQVLNW RIWPGKLTSG
201: WKAFVKDNNL KVGNVCTFEL IDGTKLTFLV HIFKGTKSSN CSTSQGRIDV
001: MPRPFFHKLI FSSTIQEKRL RVPDKFVSKF KDELSVAVAL TVPDGHVWRV GLRKADNKIW FQDGWQEFVD RYSIRIGYLL IFRYEGNSAF SVYIFNLSHS
101: EINYHSTGLM DSAHNHFKRA RLFEDLEDED AEVIFPSSVY PSPLPESTVP ANKGYASSAI QTLFTGPVKA EEPTPTPKIP KKRGRKKKNA DPEEINSSAP
201: RDDDPENRSK FYESASARKR TVTAEERERA INAAKTFEPT NPFFRVVLRP SYLYRGCIMY LPSGFAEKYL SGISGFIKVQ LAEKQWPVRC LYKAGRAKFS
301: QGWYEFTLEN NLGEGDVCVF ELLRTRDFVL KVTAFRVNEY V
101: EINYHSTGLM DSAHNHFKRA RLFEDLEDED AEVIFPSSVY PSPLPESTVP ANKGYASSAI QTLFTGPVKA EEPTPTPKIP KKRGRKKKNA DPEEINSSAP
201: RDDDPENRSK FYESASARKR TVTAEERERA INAAKTFEPT NPFFRVVLRP SYLYRGCIMY LPSGFAEKYL SGISGFIKVQ LAEKQWPVRC LYKAGRAKFS
301: QGWYEFTLEN NLGEGDVCVF ELLRTRDFVL KVTAFRVNEY V
Arabidopsis Description
VRN1AP2/B3-like transcriptional factor family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQ83]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.