Factsheet for Solyc03g043580.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 2
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g044110.1.1	Tomato	nucleus	85.76	85.76
Solyc03g042510.1.1	Tomato	nucleus	37.46	62.69
Solyc01g015210.1.1	Tomato	nucleus	44.58	50.7
Solyc01g034190.1.1	Tomato	cytoskeleton, cytosol, nucleus	13.93	46.39
Solyc03g042500.1.1	Tomato	mitochondrion	25.7	40.89
Solyc11g045450.1.1	Tomato	cytosol	33.13	36.03
Solyc02g065350.2.1	Tomato	mitochondrion	26.63	25.98
KRH46517	Soybean	nucleus	18.27	23.05
Solyc04g015500.2.1	Tomato	cytosol	14.86	22.12
Solyc03g043570.1.1	Tomato	cytosol	8.98	21.8
KRG90691	Soybean	nucleus	17.65	21.35
KRG94732	Soybean	nucleus	16.1	20.8
KRH54937	Soybean	nucleus	19.5	20.59
KRH46518	Soybean	nucleus	17.03	19.3
KRG90690	Soybean	cytosol, mitochondrion, nucleus	17.65	19.13
KRG99575	Soybean	nucleus	19.2	18.02
KRH18416	Soybean	nucleus	17.03	17.97
KRH38154	Soybean	nucleus	19.5	17.5
KRH06798	Soybean	cytosol	18.58	16.53
KRH49477	Soybean	nucleus	15.17	15.22
KRH36061	Soybean	golgi, nucleus	17.96	14.99
KRH36062	Soybean	nucleus	16.41	14.44
KRH38192	Soybean	endoplasmic reticulum, golgi	21.67	13.26
KRG90686	Soybean	nucleus	17.03	12.79
KRG90687	Soybean	nucleus	17.34	12.33
VIT_07s0255g00070.t01	Wine grape	nucleus	13.0	12.0
Solyc08g068540.2.1	Tomato	nucleus	16.72	10.82
Solyc08g029090.2.1	Tomato	nucleus	18.89	10.45
Solyc07g054630.2.1	Tomato	nucleus	18.27	10.21
Solyc05g017730.1.1	Tomato	cytosol	1.86	5.04
Solyc02g021260.1.1	Tomato	nucleus, plasma membrane	16.41	4.02

Protein Annotations

Gene3D:2.40.330.10	MapMan:35.1	InterPro:B3_DNA-bd	InterPro:DNA-bd_pseudobarrel_sf	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR003340	InterPro:IPR015300	UniProt:K4BFX9	PFAM:PF02362	PFscan:PS50863
PANTHER:PTHR31920	PANTHER:PTHR31920:SF26	SMART:SM01019	SUPFAM:SSF101936	EnsemblPlantsGene:Solyc03g043580.1	EnsemblPlants:Solyc03g043580.1.1
UniParc:UPI0002767F82	:	:	:	:	:

Description

No Description!

Coordinates

chr3:+:7035973..7037263

Molecular Weight (calculated)

36853.8 Da

IEP (calculated)

4.557

GRAVY (calculated)

-0.323

Length

323 amino acids

Sequence
(BLAST)

001: MANEFHGSSL RSSSPNNPKF IQIITSLDEL RRLRIPVVFA KRHCENMLNP VFLEAPHGKS WEVEVENSQG QIWLAKGWSD FCDYYSISVK SVLMFTYNPR
101: CHFSVAIYDQ SKTEIEYPID KDIESDEQEE DILFAQANAN IIEEDILILQ SNANVIEEDI PILQSNANVI EDEEEHIPVN CPQTNANVIE QHKEVGEANS
201: ISEKVGPNNY SSRYSLVDLT GDNPFFEMVI KKSHATCMAI PLRFAQQTDI INMKNMRLVN EEGVEWKVEI EYARSMVIIK QGWTAFRKDN KIANGETCLF
301: KLIQGPIANV LQVQKIPTPL CLQ

Best Arabidopsis Sequence Match ( AT1G49475.1 )
(BLAST)

001: MRNMHTNRRS PGPITSAATQ RRLKPEPEPT VKKFIKIILL SRIIEKMMKV PARFVRFGPK LTDNVTLQTP VGFKRSIRIK RIGDEVWFEK GWSEFAEAHS
101: LSDGHFLFFH YEGDSCFRVV IFDVSASEIE YPLDDTDDNR EEVMDDDEQG FTGFESSDDD GEVVDMDELL KKKKKKPRVN IKSENVIILD

Arabidopsis Description

B3 domain-containing protein At1g49475 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIB4]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.