Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plasma membrane 2
- mitochondrion 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH18416 | Soybean | nucleus | 44.44 | 52.29 |
| KRH38192 | Soybean | endoplasmic reticulum, golgi | 56.94 | 38.83 |
| KRG94732 | Soybean | nucleus | 25.56 | 36.8 |
| KRH54937 | Soybean | nucleus | 29.72 | 34.97 |
| KRG90691 | Soybean | nucleus | 25.83 | 34.83 |
| KRH46517 | Soybean | nucleus | 23.06 | 32.42 |
| KRG99575 | Soybean | nucleus | 28.33 | 29.65 |
| KRH46518 | Soybean | nucleus | 23.33 | 29.47 |
| Solyc01g034190.1.1 | Tomato | cytoskeleton, cytosol, nucleus | 7.78 | 28.87 |
| KRH06798 | Soybean | cytosol | 28.33 | 28.1 |
| KRG90690 | Soybean | cytosol, mitochondrion, nucleus | 23.06 | 27.85 |
| KRH49477 | Soybean | nucleus | 24.72 | 27.64 |
| PGSC0003DMT400007199 | Potato | nucleus | 23.06 | 24.92 |
| PGSC0003DMT400043852 | Potato | nucleus | 23.89 | 23.82 |
| KRH36061 | Soybean | golgi, nucleus | 25.56 | 23.77 |
| Solyc02g065350.2.1 | Tomato | mitochondrion | 21.67 | 23.57 |
| Solyc03g042510.1.1 | Tomato | nucleus | 11.94 | 22.28 |
| PGSC0003DMT400096938 | Potato | nucleus | 10.83 | 21.2 |
| Solyc01g015210.1.1 | Tomato | nucleus | 16.39 | 20.77 |
| PGSC0003DMT400007200 | Potato | cytosol | 18.61 | 20.43 |
| Solyc03g042500.1.1 | Tomato | mitochondrion | 11.39 | 20.2 |
| KRG90686 | Soybean | nucleus | 23.89 | 20.0 |
| KRH29559 | Soybean | nucleus | 23.89 | 19.95 |
| KRH36062 | Soybean | nucleus | 20.0 | 19.62 |
| Solyc03g043580.1.1 | Tomato | cytosol | 17.5 | 19.5 |
| KRH24554 | Soybean | nucleus | 23.89 | 19.5 |
| Solyc04g015500.2.1 | Tomato | cytosol | 11.67 | 19.35 |
| KRG89212 | Soybean | nucleus | 23.33 | 19.31 |
| Solyc03g044110.1.1 | Tomato | nucleus | 17.22 | 19.2 |
| KRG90687 | Soybean | nucleus | 23.89 | 18.94 |
| KRG90688 | Soybean | nucleus | 6.67 | 18.75 |
| PGSC0003DMT400070034 | Potato | cytoskeleton, cytosol, nucleus | 11.67 | 18.42 |
| KRH49567 | Soybean | mitochondrion, nucleus | 23.61 | 18.16 |
| PGSC0003DMT400091092 | Potato | nucleus | 15.0 | 18.06 |
| Solyc03g043570.1.1 | Tomato | cytosol | 6.39 | 17.29 |
| Solyc11g045450.1.1 | Tomato | cytosol | 13.89 | 16.84 |
| PGSC0003DMT400085817 | Potato | nucleus | 22.5 | 15.55 |
| KRH36063 | Soybean | nucleus | 12.78 | 14.56 |
| Solyc08g029090.2.1 | Tomato | nucleus | 22.78 | 14.04 |
| VIT_07s0255g00070.t01 | Wine grape | nucleus | 13.33 | 13.71 |
| PGSC0003DMT400037688 | Potato | nucleus | 22.5 | 10.87 |
| Solyc02g021260.1.1 | Tomato | nucleus, plasma membrane | 19.17 | 5.24 |
Protein Annotations
| EntrezGene:100815331 | Gene3D:2.40.330.10 | MapMan:35.1 | EMBL:ACUP02005674 | InterPro:B3_DNA-bd | InterPro:DNA-bd_pseudobarrel_sf |
| EnsemblPlantsGene:GLYMA_09G114900 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003340 | InterPro:IPR015300 |
| UniProt:K7LDA1 | EnsemblPlants:KRH38154 | ProteinID:KRH38154 | ProteinID:KRH38154.1 | PFAM:PF02362 | PFscan:PS50863 |
| PANTHER:PTHR31674 | PANTHER:PTHR31674:SF1 | SMART:SM01019 | SUPFAM:SSF101936 | UniParc:UPI000233C323 | : |
Description
hypothetical protein
Coordinates
chr9:+:24803928..24806899
Molecular Weight (calculated)
40778.4 Da
IEP (calculated)
7.633
GRAVY (calculated)
-0.441
Length
360 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSACNKNPK PIAVRFFKNI FRASLAHGLL KLPTIFTKKY GDGMSNPVSL KSPDSTRWKI YWTKHDGEIW FQKGWKEYAT YYGLDHGHLL FFEYEGTSHF
101: NVHIFDTSAV EIDYPSNGTH HGKDSSHVEI SDDPVEILDE KFSCQKTREK STVSSPQPTK KMKAGLTTNV KKRPNVVNLH RHVQIRSIKS QKAKFVKHEL
201: DEDESRGIFH TERPKGEQLT STALNRATAF RSENPSFKLV MNPSFIYGDY LEIPPEFAEI YLKKTHAVVI LEVLEGRTWP VICSAPTITG GWHKFASENH
301: LNVGDVCVFE LIQKIQGLAF KVSIFRGAEE PSCPISQASA DGFCEEVFCK DELECGDVTV
101: NVHIFDTSAV EIDYPSNGTH HGKDSSHVEI SDDPVEILDE KFSCQKTREK STVSSPQPTK KMKAGLTTNV KKRPNVVNLH RHVQIRSIKS QKAKFVKHEL
201: DEDESRGIFH TERPKGEQLT STALNRATAF RSENPSFKLV MNPSFIYGDY LEIPPEFAEI YLKKTHAVVI LEVLEGRTWP VICSAPTITG GWHKFASENH
301: LNVGDVCVFE LIQKIQGLAF KVSIFRGAEE PSCPISQASA DGFCEEVFCK DELECGDVTV
001: MRNMHTNRRS PGPITSAATQ RRLKPEPEPT VKKFIKIILL SRIIEKMMKV PARFVRFGPK LTDNVTLQTP VGFKRSIRIK RIGDEVWFEK GWSEFAEAHS
101: LSDGHFLFFH YEGDSCFRVV IFDVSASEIE YPLDDTDDNR EEVMDDDEQG FTGFESSDDD GEVVDMDELL KKKKKKPRVN IKSENVIILD
101: LSDGHFLFFH YEGDSCFRVV IFDVSASEIE YPLDDTDDNR EEVMDDDEQG FTGFESSDDD GEVVDMDELL KKKKKKPRVN IKSENVIILD
Arabidopsis Description
B3 domain-containing protein At1g49475 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIB4]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.