Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi
Predictor Summary:
Predictor Summary:
- plastid 3
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 5
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH38154 | Soybean | nucleus | 38.83 | 56.94 |
| KRH18416 | Soybean | nucleus | 27.08 | 46.73 |
| KRG90691 | Soybean | nucleus | 19.32 | 38.2 |
| KRG94732 | Soybean | nucleus | 17.8 | 37.6 |
| KRH46517 | Soybean | nucleus | 16.1 | 33.2 |
| KRH06798 | Soybean | cytosol | 22.35 | 32.51 |
| KRH54937 | Soybean | nucleus | 18.75 | 32.35 |
| KRH46518 | Soybean | nucleus | 16.86 | 31.23 |
| KRG90690 | Soybean | cytosol, mitochondrion, nucleus | 17.05 | 30.2 |
| Solyc01g034190.1.1 | Tomato | cytoskeleton, cytosol, nucleus | 5.49 | 29.9 |
| KRG99575 | Soybean | nucleus | 18.94 | 29.07 |
| KRH36061 | Soybean | golgi, nucleus | 20.64 | 28.17 |
| KRH49477 | Soybean | nucleus | 16.86 | 27.64 |
| PGSC0003DMT400043852 | Potato | nucleus | 16.29 | 23.82 |
| KRH36062 | Soybean | nucleus | 16.48 | 23.71 |
| Solyc02g065350.2.1 | Tomato | mitochondrion | 14.77 | 23.57 |
| PGSC0003DMT400007199 | Potato | nucleus | 14.77 | 23.42 |
| PGSC0003DMT400096938 | Potato | nucleus | 8.14 | 23.37 |
| Solyc03g042510.1.1 | Tomato | nucleus | 8.33 | 22.8 |
| KRG90687 | Soybean | nucleus | 19.51 | 22.69 |
| KRG90686 | Soybean | nucleus | 18.37 | 22.56 |
| Solyc03g044110.1.1 | Tomato | nucleus | 13.45 | 21.98 |
| Solyc03g043580.1.1 | Tomato | cytosol | 13.26 | 21.67 |
| Solyc04g015500.2.1 | Tomato | cytosol | 8.9 | 21.66 |
| PGSC0003DMT400007200 | Potato | cytosol | 13.45 | 21.65 |
| PGSC0003DMT400070034 | Potato | cytoskeleton, cytosol, nucleus | 9.28 | 21.49 |
| PGSC0003DMT400091092 | Potato | nucleus | 11.74 | 20.74 |
| Solyc03g042500.1.1 | Tomato | mitochondrion | 7.95 | 20.69 |
| Solyc01g015210.1.1 | Tomato | nucleus | 10.8 | 20.07 |
| KRH29559 | Soybean | nucleus | 16.29 | 19.95 |
| KRG89212 | Soybean | nucleus | 15.91 | 19.31 |
| KRH24554 | Soybean | nucleus | 16.1 | 19.27 |
| PGSC0003DMT400085817 | Potato | nucleus | 17.99 | 18.23 |
| KRH49567 | Soybean | mitochondrion, nucleus | 16.1 | 18.16 |
| Solyc11g045450.1.1 | Tomato | cytosol | 10.04 | 17.85 |
| KRG90688 | Soybean | nucleus | 4.17 | 17.19 |
| Solyc03g043570.1.1 | Tomato | cytosol | 3.98 | 15.79 |
| KRH36063 | Soybean | nucleus | 9.09 | 15.19 |
| VIT_07s0255g00070.t01 | Wine grape | nucleus | 9.28 | 14.0 |
| Solyc08g029090.2.1 | Tomato | nucleus | 14.96 | 13.53 |
| PGSC0003DMT400037688 | Potato | nucleus | 14.96 | 10.6 |
| Solyc02g021260.1.1 | Tomato | nucleus, plasma membrane | 16.86 | 6.76 |
Protein Annotations
| EntrezGene:100818507 | Gene3D:2.40.330.10 | MapMan:35.1 | EMBL:ACUP02005749 | InterPro:B3_DNA-bd | InterPro:DNA-bd_pseudobarrel_sf |
| EnsemblPlantsGene:GLYMA_09G117200 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003340 | InterPro:IPR015300 |
| UniProt:K7LDC4 | EnsemblPlants:KRH38192 | ProteinID:KRH38192 | ProteinID:KRH38192.1 | PFAM:PF02362 | PFscan:PS50863 |
| PANTHER:PTHR31674 | PANTHER:PTHR31674:SF1 | SMART:SM01019 | SUPFAM:SSF101936 | TMHMM:TMhelix | UniParc:UPI000296EF31 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr9:+:27377064..27380507
Molecular Weight (calculated)
60551.7 Da
IEP (calculated)
9.551
GRAVY (calculated)
-0.283
Length
528 amino acids
Sequence
(BLAST)
(BLAST)
001: MLQINISSSQ EAIALFFFFF ISFSALLSQK SHFAFTLRSH LRIHNMTSAR NKHPLPPAVH FVKIILTTSL ADGILLPKKF TRKYGDGMSN PVFLKPADGT
101: EWKIHYTKHG GEIWFQKGWK EFATYYSLDH GHLLFFEYEG TSHFDVHIFD SSALEIDYPS HGTHEGKDNL VEISDDSVEI LGEQFSCQNT RGSSPQPCKK
201: MKNSITTNVE RSPNVVNLHQ HVPTISNSSQ KATFMKQMLD EDDGIGIFNT EYPKVEQSTS TALKKASTFR SEHPFFRLVM KPSFINGYYL EIPPQFAERY
301: LKKTHAIVIL EILDGRTWSV ICSATRLTEG WQKFASENNL NVGDVCVFEL IQKIQGLCFK VSIYQGAEEP ICPISQVHPS TNWTGGTSSQ RSSQVKSRSK
401: LKILTIRYIA LKRASKFTSE NPFFMVTLTT KLKSIITRDV HVPMDFVRKH LVNVKQKLMM IHFRKKLWPV RFVVRESSTV SGNLSTGWAW FVRENELQRG
501: DVCIFELFNR EDATFDAHVF RGHREVMH
101: EWKIHYTKHG GEIWFQKGWK EFATYYSLDH GHLLFFEYEG TSHFDVHIFD SSALEIDYPS HGTHEGKDNL VEISDDSVEI LGEQFSCQNT RGSSPQPCKK
201: MKNSITTNVE RSPNVVNLHQ HVPTISNSSQ KATFMKQMLD EDDGIGIFNT EYPKVEQSTS TALKKASTFR SEHPFFRLVM KPSFINGYYL EIPPQFAERY
301: LKKTHAIVIL EILDGRTWSV ICSATRLTEG WQKFASENNL NVGDVCVFEL IQKIQGLCFK VSIYQGAEEP ICPISQVHPS TNWTGGTSSQ RSSQVKSRSK
401: LKILTIRYIA LKRASKFTSE NPFFMVTLTT KLKSIITRDV HVPMDFVRKH LVNVKQKLMM IHFRKKLWPV RFVVRESSTV SGNLSTGWAW FVRENELQRG
501: DVCIFELFNR EDATFDAHVF RGHREVMH
001: MVITRNMKAR ATSVSHRQSQ QDPESPVKKF FKLVLPSTMK DKMMRIPPRF VKLQGSKLSE VVTLVTPAGY KRSIKLKRIG EEIWFHEGWS EFAEAHSIEE
101: GHFLLFEYKK NSSFRVIIFN ASACETNYPL DAVHIIDSDD DVIEITGKEF DTEHKSKKRP RDIEFDKILH DVDVMQVLKE EEEDKRVLRG
101: GHFLLFEYKK NSSFRVIIFN ASACETNYPL DAVHIIDSDD DVIEITGKEF DTEHKSKKRP RDIEFDKILH DVDVMQVLKE EEEDKRVLRG
Arabidopsis Description
B3 domain-containing protein At4g01580 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSH7]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.