Factsheet for PGSC0003DMT400091092

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc11g045450.1.1	Tomato	cytosol	49.83	50.17
PGSC0003DMT400007200	Potato	cytosol	44.15	40.24
PGSC0003DMT400096938	Potato	nucleus	18.73	30.43
PGSC0003DMT400007199	Potato	nucleus	29.1	26.13
PGSC0003DMT400043852	Potato	nucleus	26.09	21.61
KRG94732	Soybean	nucleus	15.72	18.8
KRG90690	Soybean	cytosol, mitochondrion, nucleus	18.73	18.79
KRH46517	Soybean	nucleus	16.05	18.75
KRH54937	Soybean	nucleus	19.06	18.63
KRG90691	Soybean	nucleus	16.05	17.98
KRH06798	Soybean	cytosol	20.4	16.8
KRG99575	Soybean	nucleus	19.06	16.57
PGSC0003DMT400070034	Potato	cytoskeleton, cytosol, nucleus	12.37	16.23
KRH49477	Soybean	nucleus	17.39	16.15
KRH46518	Soybean	nucleus	15.38	16.14
KRH18416	Soybean	nucleus	15.38	15.03
KRH38154	Soybean	nucleus	18.06	15.0
KRH36061	Soybean	golgi, nucleus	16.72	12.92
PGSC0003DMT400085817	Potato	nucleus	21.4	12.28
KRG90686	Soybean	nucleus	17.39	12.09
KRH36062	Soybean	nucleus	14.72	11.99
KRH38192	Soybean	endoplasmic reticulum, golgi	20.74	11.74
KRG90687	Soybean	nucleus	16.72	11.01
VIT_07s0255g00070.t01	Wine grape	nucleus	12.37	10.57
PGSC0003DMT400047299	Potato	nucleus	17.39	9.79
PGSC0003DMT400037688	Potato	nucleus	19.73	7.92

Protein Annotations

Gene3D:2.40.330.10	MapMan:35.2	InterPro:B3_DNA-bd	InterPro:DNA-bd_pseudobarrel_sf	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR003340	InterPro:IPR015300	UniProt:M1DLV3	PFAM:PF02362	EnsemblPlantsGene:PGSC0003DMG400040663
PGSC:PGSC0003DMG400040663	EnsemblPlants:PGSC0003DMT400091092	PFscan:PS50863	PANTHER:PTHR31920	PANTHER:PTHR31920:SF26	SMART:SM01019
SUPFAM:SSF101936	UniParc:UPI000296B18D	SEG:seg	:	:	:

Description

Sulfotransferase [Source:PGSC_GENE;Acc:PGSC0003DMG400040663]

Coordinates

chr11:+:32982243..32983692

Molecular Weight (calculated)

34958.9 Da

IEP (calculated)

4.615

GRAVY (calculated)

-0.769

Length

299 amino acids

Sequence
(BLAST)

001: MLNPVFLQAP YGKAWEVEVE HSQGQIWLVK GWKEFSDYYA ISIRQFLIFG YNARDHFDVT IFDMSTTEIE YPIEDIESDD SMDMLDHFAE NLSHGPLVEK
101: RRRKRQEGEE EDDSRVNLQT NANVIEEEEE DIPINLQTNA NALEEEESQE ISEGCEEHEQ KPKIGTDQEV GEANHRSEEI GSKNNSRYSV VNLTGDTPYF
201: EIVIKKTHTT YMTIPMRFAK RTNIVNMKNM RLVNEEGIEW GVEIEYTERR AIIKRGWTEF RKDNKIASGE TIRFKLIQGR VANVLQVQKI PTPHSLRYY

Best Arabidopsis Sequence Match ( AT3G18990.1 )
(BLAST)

001: MPRPFFHKLI FSSTIQEKRL RVPDKFVSKF KDELSVAVAL TVPDGHVWRV GLRKADNKIW FQDGWQEFVD RYSIRIGYLL IFRYEGNSAF SVYIFNLSHS
101: EINYHSTGLM DSAHNHFKRA RLFEDLEDED AEVIFPSSVY PSPLPESTVP ANKGYASSAI QTLFTGPVKA EEPTPTPKIP KKRGRKKKNA DPEEINSSAP
201: RDDDPENRSK FYESASARKR TVTAEERERA INAAKTFEPT NPFFRVVLRP SYLYRGCIMY LPSGFAEKYL SGISGFIKVQ LAEKQWPVRC LYKAGRAKFS
301: QGWYEFTLEN NLGEGDVCVF ELLRTRDFVL KVTAFRVNEY V

Arabidopsis Description

VRN1AP2/B3-like transcriptional factor family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQ83]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.