Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- plasma membrane 2
- nucleus 3
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG94732 | Soybean | nucleus | 44.77 | 61.6 |
| KRH06798 | Soybean | cytosol | 51.16 | 48.48 |
| KRH54937 | Soybean | nucleus | 42.73 | 48.04 |
| KRH46517 | Soybean | nucleus | 25.87 | 34.77 |
| KRG90691 | Soybean | nucleus | 26.45 | 34.08 |
| KRH46518 | Soybean | nucleus | 27.33 | 32.98 |
| KRG90690 | Soybean | cytosol, mitochondrion, nucleus | 25.29 | 29.19 |
| Solyc01g034190.1.1 | Tomato | cytoskeleton, cytosol, nucleus | 8.14 | 28.87 |
| KRH38154 | Soybean | nucleus | 29.65 | 28.33 |
| KRH18416 | Soybean | nucleus | 23.55 | 26.47 |
| Solyc02g065350.2.1 | Tomato | mitochondrion | 24.71 | 25.68 |
| PGSC0003DMT400007199 | Potato | nucleus | 24.13 | 24.92 |
| KRH49477 | Soybean | nucleus | 22.09 | 23.6 |
| KRH36061 | Soybean | golgi, nucleus | 25.58 | 22.74 |
| PGSC0003DMT400070034 | Potato | cytoskeleton, cytosol, nucleus | 14.83 | 22.37 |
| Solyc03g042500.1.1 | Tomato | mitochondrion | 13.08 | 22.17 |
| PGSC0003DMT400043852 | Potato | nucleus | 23.26 | 22.16 |
| PGSC0003DMT400096938 | Potato | nucleus | 11.63 | 21.74 |
| Solyc04g015500.2.1 | Tomato | cytosol | 13.08 | 20.74 |
| KRG90686 | Soybean | nucleus | 25.58 | 20.47 |
| KRH29559 | Soybean | nucleus | 25.29 | 20.19 |
| KRH36062 | Soybean | nucleus | 21.51 | 20.16 |
| Solyc03g044110.1.1 | Tomato | nucleus | 18.9 | 20.12 |
| Solyc01g015210.1.1 | Tomato | nucleus | 16.57 | 20.07 |
| PGSC0003DMT400007200 | Potato | cytosol | 18.9 | 19.82 |
| Solyc03g042510.1.1 | Tomato | nucleus | 11.05 | 19.69 |
| KRG90687 | Soybean | nucleus | 25.87 | 19.6 |
| KRH24554 | Soybean | nucleus | 24.71 | 19.27 |
| Solyc03g043580.1.1 | Tomato | cytosol | 18.02 | 19.2 |
| PGSC0003DMT400091092 | Potato | nucleus | 16.57 | 19.06 |
| KRH38192 | Soybean | endoplasmic reticulum, golgi | 29.07 | 18.94 |
| KRG89212 | Soybean | nucleus | 23.55 | 18.62 |
| KRH49567 | Soybean | mitochondrion, nucleus | 23.84 | 17.52 |
| Solyc11g045450.1.1 | Tomato | cytosol | 14.83 | 17.17 |
| Solyc03g043570.1.1 | Tomato | cytosol | 6.4 | 16.54 |
| PGSC0003DMT400085817 | Potato | nucleus | 23.84 | 15.74 |
| VIT_07s0255g00070.t01 | Wine grape | nucleus | 15.41 | 15.14 |
| Solyc08g029090.2.1 | Tomato | nucleus | 24.13 | 14.21 |
| KRG90688 | Soybean | nucleus | 5.23 | 14.06 |
| KRH36063 | Soybean | nucleus | 12.79 | 13.92 |
| PGSC0003DMT400037688 | Potato | nucleus | 24.42 | 11.28 |
| Solyc02g021260.1.1 | Tomato | nucleus, plasma membrane | 17.73 | 4.63 |
Protein Annotations
| EntrezGene:100819782 | Gene3D:2.40.330.10 | MapMan:35.1 | EMBL:ACUP02011139 | InterPro:B3_DNA-bd | InterPro:DNA-bd_pseudobarrel_sf |
| EnsemblPlantsGene:GLYMA_18G155000 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003340 | InterPro:IPR015300 |
| UniProt:K7MSG4 | EnsemblPlants:KRG99575 | ProteinID:KRG99575 | ProteinID:KRG99575.1 | PFAM:PF02362 | PFscan:PS50863 |
| PANTHER:PTHR31920 | PANTHER:PTHR31920:SF26 | SMART:SM01019 | SUPFAM:SSF101936 | UniParc:UPI000233F0ED | : |
Description
hypothetical protein
Coordinates
chr18:+:32216208..32218820
Molecular Weight (calculated)
39763.6 Da
IEP (calculated)
10.753
GRAVY (calculated)
-0.486
Length
344 amino acids
Sequence
(BLAST)
(BLAST)
001: MAATFPQQLL VKPIHFFKII TAHNVHEGKL MIPNKFVKKY GKRLQNTLFL KTPNGAEWKM ILKKRDGKIW FQKGWKEFAE YHSLAHGHLL VFRWDVTSHF
101: QVHIFDLSAL EIEYPTEIIK GKTASNRKGN ESPGDEHLEC HRSGQKRKVN SVEFLQQCQM RSRKCVKVEN TMILPRQALH HTATKCKGKS KAMDNQVTAL
201: DRASSFKSCN PFFLTVMHRT HISSHGSLNL PMKFCRSHLD LHKKRRLISL QVLSGRIWPA KYQIHKQKTA IRFKLSWNAF VKDNNLKVGD VCIFELVHGT
301: KLTFLVHIFR ETDSSNCSTS QESGQMRAAC QSQRKELKTI TATK
101: QVHIFDLSAL EIEYPTEIIK GKTASNRKGN ESPGDEHLEC HRSGQKRKVN SVEFLQQCQM RSRKCVKVEN TMILPRQALH HTATKCKGKS KAMDNQVTAL
201: DRASSFKSCN PFFLTVMHRT HISSHGSLNL PMKFCRSHLD LHKKRRLISL QVLSGRIWPA KYQIHKQKTA IRFKLSWNAF VKDNNLKVGD VCIFELVHGT
301: KLTFLVHIFR ETDSSNCSTS QESGQMRAAC QSQRKELKTI TATK
001: MRNMHTNRRS PGPITSAATQ RRLKPEPEPT VKKFIKIILL SRIIEKMMKV PARFVRFGPK LTDNVTLQTP VGFKRSIRIK RIGDEVWFEK GWSEFAEAHS
101: LSDGHFLFFH YEGDSCFRVV IFDVSASEIE YPLDDTDDNR EEVMDDDEQG FTGFESSDDD GEVVDMDELL KKKKKKPRVN IKSENVIILD
101: LSDGHFLFFH YEGDSCFRVV IFDVSASEIE YPLDDTDDNR EEVMDDDEQG FTGFESSDDD GEVVDMDELL KKKKKKPRVN IKSENVIILD
Arabidopsis Description
B3 domain-containing protein At1g49475 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIB4]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.