CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 4
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG90688	Soybean	nucleus	16.77	41.41
KRG90691	Soybean	nucleus	16.77	19.85
KRG94732	Soybean	nucleus	15.19	19.2
KRH46517	Soybean	nucleus	14.87	18.36
KRH46518	Soybean	nucleus	14.87	16.49
KRG90690	Soybean	cytosol, mitochondrion, nucleus	15.19	16.11
KRH49477	Soybean	nucleus	14.87	14.6
KRH54937	Soybean	nucleus	13.92	14.38
KRH06798	Soybean	cytosol	15.51	13.5
KRH24554	Soybean	nucleus	18.04	12.93
KRG99575	Soybean	nucleus	13.92	12.79
KRH38154	Soybean	nucleus	14.56	12.78
KRH18416	Soybean	nucleus	12.34	12.75
KRG89212	Soybean	nucleus	17.41	12.64
KRH29559	Soybean	nucleus	16.77	12.3
KRH49567	Soybean	mitochondrion, nucleus	17.09	11.54
KRG90686	Soybean	nucleus	15.19	11.16
KRH36061	Soybean	golgi, nucleus	13.29	10.85
KRG90687	Soybean	nucleus	15.19	10.57
KRH36062	Soybean	nucleus	11.71	10.08
KRH38192	Soybean	endoplasmic reticulum, golgi	15.19	9.09
Solyc05g017730.1.1	Tomato	cytosol	2.85	7.56

Protein Annotations

Gene3D:2.40.330.10	MapMan:35.2	UniProt:A0A0R0IAK0	EMBL:ACUP02006718	InterPro:B3_DNA-bd	InterPro:DNA-bd_pseudobarrel_sf
EnsemblPlantsGene:GLYMA_10G281300	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003340	InterPro:IPR015300
EnsemblPlants:KRH36063	ProteinID:KRH36063	ProteinID:KRH36063.1	PFAM:PF02362	PFscan:PS50863	PANTHER:PTHR31920
PANTHER:PTHR31920:SF26	SMART:SM01019	SUPFAM:SSF101936	UniParc:UPI0006ED797A	:	:

Description

hypothetical protein

Coordinates

chr10:+:50251157..50252837

Molecular Weight (calculated)

36873.1 Da

IEP (calculated)

9.038

GRAVY (calculated)

-0.501

Length

316 amino acids

Sequence
(BLAST)

001: MQYPLMSETL LDGNSICQRK RAKSPFSHSP SIKKVKTNPR KEPANYPSHD VGMWDFFLSF GRFRSKCSGR RRIMCSKSKA IQNTESSTAL ERANSFRSEN
101: PFFICAMRKT YIQRSVLFMP GNFITEDQQR EDDHVFLWIS SERAWHVKFY PSHSSGQILL SIGWMDFVKD NNLKIGDVCV FDQIKKPGIS FRVVIFRDTE
201: ESSPSKFPDS EFRRCNNEVS ENDFTLSISK PCQFYCMYVP KKFIRSHEMD HINEVKLQVG KRSWNVKLDC YGRFTSGLHD FLSQCNVEAG DVCHFELIDK
301: KKFVFEVRVT RCISID

Best Arabidopsis Sequence Match ( AT3G18990.1 )
(BLAST)

001: MPRPFFHKLI FSSTIQEKRL RVPDKFVSKF KDELSVAVAL TVPDGHVWRV GLRKADNKIW FQDGWQEFVD RYSIRIGYLL IFRYEGNSAF SVYIFNLSHS
101: EINYHSTGLM DSAHNHFKRA RLFEDLEDED AEVIFPSSVY PSPLPESTVP ANKGYASSAI QTLFTGPVKA EEPTPTPKIP KKRGRKKKNA DPEEINSSAP
201: RDDDPENRSK FYESASARKR TVTAEERERA INAAKTFEPT NPFFRVVLRP SYLYRGCIMY LPSGFAEKYL SGISGFIKVQ LAEKQWPVRC LYKAGRAKFS
301: QGWYEFTLEN NLGEGDVCVF ELLRTRDFVL KVTAFRVNEY V

Arabidopsis Description

VRN1AP2/B3-like transcriptional factor family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQ83]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.