Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- nucleus 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH38154 | Soybean | nucleus | 52.29 | 44.44 |
| KRG94732 | Soybean | nucleus | 25.16 | 30.8 |
| Solyc01g034190.1.1 | Tomato | cytoskeleton, cytosol, nucleus | 9.48 | 29.9 |
| KRG90691 | Soybean | nucleus | 25.82 | 29.59 |
| KRH46517 | Soybean | nucleus | 23.86 | 28.52 |
| KRH54937 | Soybean | nucleus | 28.1 | 28.1 |
| KRH46518 | Soybean | nucleus | 25.82 | 27.72 |
| KRH38192 | Soybean | endoplasmic reticulum, golgi | 46.73 | 27.08 |
| KRG90690 | Soybean | cytosol, mitochondrion, nucleus | 24.18 | 24.83 |
| KRH06798 | Soybean | cytosol | 28.43 | 23.97 |
| KRG99575 | Soybean | nucleus | 26.47 | 23.55 |
| PGSC0003DMT400096938 | Potato | nucleus | 13.4 | 22.28 |
| Solyc04g015500.2.1 | Tomato | cytosol | 15.03 | 21.2 |
| KRH36061 | Soybean | golgi, nucleus | 25.82 | 20.41 |
| Solyc03g042510.1.1 | Tomato | nucleus | 12.75 | 20.21 |
| PGSC0003DMT400070034 | Potato | cytoskeleton, cytosol, nucleus | 15.03 | 20.18 |
| PGSC0003DMT400043852 | Potato | nucleus | 23.53 | 19.94 |
| KRH49477 | Soybean | nucleus | 20.91 | 19.88 |
| Solyc02g065350.2.1 | Tomato | mitochondrion | 20.59 | 19.03 |
| PGSC0003DMT400007199 | Potato | nucleus | 20.59 | 18.92 |
| Solyc03g042500.1.1 | Tomato | mitochondrion | 12.42 | 18.72 |
| KRH36062 | Soybean | nucleus | 22.22 | 18.53 |
| Solyc01g015210.1.1 | Tomato | nucleus | 16.99 | 18.31 |
| KRG89212 | Soybean | nucleus | 24.84 | 17.47 |
| KRH29559 | Soybean | nucleus | 24.18 | 17.17 |
| Solyc03g043580.1.1 | Tomato | cytosol | 17.97 | 17.03 |
| Solyc03g044110.1.1 | Tomato | nucleus | 17.97 | 17.03 |
| KRG90686 | Soybean | nucleus | 23.53 | 16.74 |
| PGSC0003DMT400007200 | Potato | cytosol | 17.65 | 16.46 |
| KRH49567 | Soybean | mitochondrion, nucleus | 25.16 | 16.45 |
| KRH24554 | Soybean | nucleus | 23.53 | 16.33 |
| PGSC0003DMT400091092 | Potato | nucleus | 15.03 | 15.38 |
| KRG90687 | Soybean | nucleus | 22.55 | 15.2 |
| Solyc11g045450.1.1 | Tomato | cytosol | 13.73 | 14.14 |
| Solyc03g043570.1.1 | Tomato | cytosol | 5.88 | 13.53 |
| KRG90688 | Soybean | nucleus | 5.56 | 13.28 |
| KRH36063 | Soybean | nucleus | 12.75 | 12.34 |
| Solyc08g029090.2.1 | Tomato | nucleus | 22.22 | 11.64 |
| VIT_07s0255g00070.t01 | Wine grape | nucleus | 12.75 | 11.14 |
| PGSC0003DMT400085817 | Potato | nucleus | 18.3 | 10.75 |
| PGSC0003DMT400037688 | Potato | nucleus | 21.57 | 8.86 |
| Solyc02g021260.1.1 | Tomato | nucleus, plasma membrane | 16.34 | 3.8 |
Protein Annotations
| Gene3D:2.40.330.10 | MapMan:35.1 | UniProt:A0A0R0GJ23 | EMBL:ACUP02008071 | InterPro:B3_DNA-bd | InterPro:DNA-bd_pseudobarrel_sf |
| EnsemblPlantsGene:GLYMA_13G058500 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003340 | InterPro:IPR015300 |
| EnsemblPlants:KRH18416 | ProteinID:KRH18416 | ProteinID:KRH18416.1 | PFAM:PF02362 | PFscan:PS50863 | PANTHER:PTHR31674 |
| PANTHER:PTHR31674:SF1 | SMART:SM01019 | SUPFAM:SSF101936 | UniParc:UPI0006ED5DCC | : | : |
Description
hypothetical protein
Coordinates
chr13:+:15593710..15595584
Molecular Weight (calculated)
35091.6 Da
IEP (calculated)
8.585
GRAVY (calculated)
-0.619
Length
306 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSSHNKHPL PTAVHFFKII LRTSLAHGIL KLPKDFTTKY GDSMSNLVFL NPPDGIEWKI CWTKLDGKIW FEKGWKEYAT YYSLDHGHLL LFQYQGTSHF
101: DVHIFDNSAI EVDYPSSPGT RDGKERHVEI SDDSVEILDA QFSCQKTRVK STVPSPQPSK EMKFGPTTNV ERSPRVNLHQ HVQTGSTSSQ VKNYEARKEE
201: GKGIFNTECP KVEQLTSTTL KKATTFRLVM KPSFINGEYL KFASENNLNV GDVCVFELIQ SFAFKVQRDQ VSPFHKPIQL EWERFQNEVK EDILKRNLGT
301: KNTEKG
101: DVHIFDNSAI EVDYPSSPGT RDGKERHVEI SDDSVEILDA QFSCQKTRVK STVPSPQPSK EMKFGPTTNV ERSPRVNLHQ HVQTGSTSSQ VKNYEARKEE
201: GKGIFNTECP KVEQLTSTTL KKATTFRLVM KPSFINGEYL KFASENNLNV GDVCVFELIQ SFAFKVQRDQ VSPFHKPIQL EWERFQNEVK EDILKRNLGT
301: KNTEKG
001: MRNMHTNRRS PGPITSAATQ RRLKPEPEPT VKKFIKIILL SRIIEKMMKV PARFVRFGPK LTDNVTLQTP VGFKRSIRIK RIGDEVWFEK GWSEFAEAHS
101: LSDGHFLFFH YEGDSCFRVV IFDVSASEIE YPLDDTDDNR EEVMDDDEQG FTGFESSDDD GEVVDMDELL KKKKKKPRVN IKSENVIILD
101: LSDGHFLFFH YEGDSCFRVV IFDVSASEIE YPLDDTDDNR EEVMDDDEQG FTGFESSDDD GEVVDMDELL KKKKKKPRVN IKSENVIILD
Arabidopsis Description
B3 domain-containing protein At1g49475 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIB4]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.