Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG90687 | Soybean | nucleus | 55.81 | 52.86 |
| KRH36062 | Soybean | nucleus | 38.6 | 45.23 |
| KRH36061 | Soybean | golgi, nucleus | 33.02 | 36.69 |
| KRG94732 | Soybean | nucleus | 18.6 | 32.0 |
| KRH54937 | Soybean | nucleus | 20.93 | 29.41 |
| KRH46517 | Soybean | nucleus | 16.51 | 27.73 |
| KRH46518 | Soybean | nucleus | 17.44 | 26.32 |
| KRH06798 | Soybean | cytosol | 22.09 | 26.17 |
| Solyc01g034190.1.1 | Tomato | cytoskeleton, cytosol, nucleus | 5.81 | 25.77 |
| KRG99575 | Soybean | nucleus | 20.47 | 25.58 |
| KRH49477 | Soybean | nucleus | 18.6 | 24.84 |
| KRG90691 | Soybean | nucleus | 15.35 | 24.72 |
| KRH38154 | Soybean | nucleus | 20.0 | 23.89 |
| KRH18416 | Soybean | nucleus | 16.74 | 23.53 |
| Solyc02g065350.2.1 | Tomato | mitochondrion | 17.44 | 22.66 |
| KRG90690 | Soybean | cytosol, mitochondrion, nucleus | 14.88 | 21.48 |
| PGSC0003DMT400096938 | Potato | nucleus | 8.84 | 20.65 |
| PGSC0003DMT400043852 | Potato | nucleus | 16.98 | 20.22 |
| Solyc03g042500.1.1 | Tomato | mitochondrion | 9.53 | 20.2 |
| PGSC0003DMT400007199 | Potato | nucleus | 15.58 | 20.12 |
| Solyc03g042510.1.1 | Tomato | nucleus | 8.84 | 19.69 |
| KRG90688 | Soybean | nucleus | 5.81 | 19.53 |
| KRH38192 | Soybean | endoplasmic reticulum, golgi | 22.56 | 18.37 |
| Solyc03g044110.1.1 | Tomato | nucleus | 13.49 | 17.96 |
| Solyc04g015500.2.1 | Tomato | cytosol | 8.84 | 17.51 |
| KRH29559 | Soybean | nucleus | 17.44 | 17.4 |
| PGSC0003DMT400091092 | Potato | nucleus | 12.09 | 17.39 |
| PGSC0003DMT400007200 | Potato | cytosol | 13.26 | 17.38 |
| Solyc03g043580.1.1 | Tomato | cytosol | 12.79 | 17.03 |
| KRH24554 | Soybean | nucleus | 16.98 | 16.55 |
| Solyc11g045450.1.1 | Tomato | cytosol | 11.4 | 16.5 |
| KRG89212 | Soybean | nucleus | 16.51 | 16.32 |
| PGSC0003DMT400070034 | Potato | cytoskeleton, cytosol, nucleus | 8.6 | 16.23 |
| Solyc01g015210.1.1 | Tomato | nucleus | 10.7 | 16.2 |
| PGSC0003DMT400085817 | Potato | nucleus | 19.3 | 15.93 |
| Solyc03g043570.1.1 | Tomato | cytosol | 4.88 | 15.79 |
| KRH36063 | Soybean | nucleus | 11.16 | 15.19 |
| KRH49567 | Soybean | mitochondrion, nucleus | 16.51 | 15.17 |
| VIT_07s0255g00070.t01 | Wine grape | nucleus | 10.7 | 13.14 |
| Solyc08g029090.2.1 | Tomato | nucleus | 15.81 | 11.64 |
| PGSC0003DMT400037688 | Potato | nucleus | 14.88 | 8.59 |
| Solyc02g021260.1.1 | Tomato | nucleus, plasma membrane | 18.37 | 6.0 |
Protein Annotations
| Gene3D:2.40.330.10 | MapMan:35.1 | UniProt:A0A0R0ELZ5 | EMBL:ACUP02012633 | InterPro:B3_DNA-bd | InterPro:DNA-bd_pseudobarrel_sf |
| EnsemblPlantsGene:GLYMA_20G107900 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003340 | InterPro:IPR015300 |
| EnsemblPlants:KRG90686 | ProteinID:KRG90686 | ProteinID:KRG90686.1 | PFAM:PF02362 | PFscan:PS50863 | PANTHER:PTHR31920 |
| PANTHER:PTHR31920:SF26 | SMART:SM01019 | SUPFAM:SSF101936 | UniParc:UPI0006EDF804 | : | : |
Description
hypothetical protein
Coordinates
chr20:-:35042729..35045139
Molecular Weight (calculated)
49759.5 Da
IEP (calculated)
8.721
GRAVY (calculated)
-0.509
Length
430 amino acids
Sequence
(BLAST)
(BLAST)
001: MSFGLPSNKG FGKEDNCNRI PRSFVNKCWE GISNPVLLLL PNGVEWKVKW KKLDADILLI EDWKEFAEFC SLDKDHLLVF EYLRKSQFLV VIFDQNGLEM
101: EYPLMGGTLD GDEKGNSLCQ HKRAKSPLPF SSSIKKVKGK TLTSYPSHGV RTERAQSQRT KVEFSKEFLA EDLERGGRGR GMMNAKRRCS NSNALKSSTA
201: LERAKAFRSE NPFFIREMHP SYIHKYIMVM PGNFLTEDQQ KENDSVTLWI SEERAWHVKF YTNRSSGQIN LSTGWVDFVK DNNLKIGNVC VFEQIKKTRI
301: SFRVFIFRDG EESSPSNFSD SEFRGCNNEV SENHFTLSIK PCQFYCMNVP KKFIRNHEMD GINEVTLQVG KRSWNVKLDC YGRFTSGLHD FMSQHNVEAG
401: DVIHFELIDK KKFVFQVRVT RCISIDFELL
101: EYPLMGGTLD GDEKGNSLCQ HKRAKSPLPF SSSIKKVKGK TLTSYPSHGV RTERAQSQRT KVEFSKEFLA EDLERGGRGR GMMNAKRRCS NSNALKSSTA
201: LERAKAFRSE NPFFIREMHP SYIHKYIMVM PGNFLTEDQQ KENDSVTLWI SEERAWHVKF YTNRSSGQIN LSTGWVDFVK DNNLKIGNVC VFEQIKKTRI
301: SFRVFIFRDG EESSPSNFSD SEFRGCNNEV SENHFTLSIK PCQFYCMNVP KKFIRNHEMD GINEVTLQVG KRSWNVKLDC YGRFTSGLHD FMSQHNVEAG
401: DVIHFELIDK KKFVFQVRVT RCISIDFELL
001: MPRPFFHKLI FSSTIQEKRL RVPDKFVSKF KDELSVAVAL TVPDGHVWRV GLRKADNKIW FQDGWQEFVD RYSIRIGYLL IFRYEGNSAF SVYIFNLSHS
101: EINYHSTGLM DSAHNHFKRA RLFEDLEDED AEVIFPSSVY PSPLPESTVP ANKGYASSAI QTLFTGPVKA EEPTPTPKIP KKRGRKKKNA DPEEINSSAP
201: RDDDPENRSK FYESASARKR TVTAEERERA INAAKTFEPT NPFFRVVLRP SYLYRGCIMY LPSGFAEKYL SGISGFIKVQ LAEKQWPVRC LYKAGRAKFS
301: QGWYEFTLEN NLGEGDVCVF ELLRTRDFVL KVTAFRVNEY V
101: EINYHSTGLM DSAHNHFKRA RLFEDLEDED AEVIFPSSVY PSPLPESTVP ANKGYASSAI QTLFTGPVKA EEPTPTPKIP KKRGRKKKNA DPEEINSSAP
201: RDDDPENRSK FYESASARKR TVTAEERERA INAAKTFEPT NPFFRVVLRP SYLYRGCIMY LPSGFAEKYL SGISGFIKVQ LAEKQWPVRC LYKAGRAKFS
301: QGWYEFTLEN NLGEGDVCVF ELLRTRDFVL KVTAFRVNEY V
Arabidopsis Description
VRN1AP2/B3-like transcriptional factor family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQ83]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.