Factsheet for PGSC0003DMT400007199

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
mitochondrion 2
nucleus 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g065350.2.1	Tomato	mitochondrion	68.47	68.88
PGSC0003DMT400043852	Potato	nucleus	45.05	41.55
PGSC0003DMT400096938	Potato	nucleus	21.62	39.13
KRG94732	Soybean	nucleus	22.22	29.6
PGSC0003DMT400091092	Potato	nucleus	26.13	29.1
KRH46517	Soybean	nucleus	21.62	28.12
PGSC0003DMT400007200	Potato	cytosol	26.73	27.13
PGSC0003DMT400085817	Potato	nucleus	42.34	27.06
KRG90691	Soybean	nucleus	21.02	26.22
KRH46518	Soybean	nucleus	22.22	25.96
PGSC0003DMT400070034	Potato	cytoskeleton, cytosol, nucleus	17.72	25.88
KRH54937	Soybean	nucleus	22.52	24.51
KRG99575	Soybean	nucleus	24.92	24.13
KRH06798	Soybean	cytosol	25.53	23.42
KRH38154	Soybean	nucleus	24.92	23.06
KRG90690	Soybean	cytosol, mitochondrion, nucleus	19.52	21.81
KRH49477	Soybean	nucleus	21.02	21.74
KRH18416	Soybean	nucleus	18.92	20.59
KRH36061	Soybean	golgi, nucleus	20.72	17.83
KRH36062	Soybean	nucleus	19.22	17.44
KRG90686	Soybean	nucleus	20.12	15.58
KRH38192	Soybean	endoplasmic reticulum, golgi	23.42	14.77
KRG90687	Soybean	nucleus	19.82	14.54
VIT_07s0255g00070.t01	Wine grape	nucleus	13.51	12.86
PGSC0003DMT400037688	Potato	nucleus	27.33	12.21
PGSC0003DMT400047299	Potato	nucleus	17.12	10.73

Protein Annotations

EntrezGene:102595417	Gene3D:2.40.330.10	MapMan:35.1	InterPro:B3_DNA-bd	InterPro:DNA-bd_pseudobarrel_sf	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR003340	InterPro:IPR015300	UniProt:M0ZSN0	PFAM:PF02362
EnsemblPlantsGene:PGSC0003DMG400002784	PGSC:PGSC0003DMG400002784	EnsemblPlants:PGSC0003DMT400007199	PFscan:PS50863	PANTHER:PTHR31920	PANTHER:PTHR31920:SF26
SMART:SM01019	SUPFAM:SSF101936	UniParc:UPI000296BC6C	RefSeq:XP_006344812.1	SEG:seg	:

Description

Sulfotransferase [Source:PGSC_GENE;Acc:PGSC0003DMG400002784]

Coordinates

chr2:+:24371891..24374190

Molecular Weight (calculated)

38297.4 Da

IEP (calculated)

5.304

GRAVY (calculated)

-0.372

Length

333 amino acids

Sequence
(BLAST)

001: MVHKFRKQIG EVSSISNISQ PKFCKIIFSP HELCRLRIPK GFASRYCKNI LNPVYLEVPS GEVWEVELEH SEGHIWLAEG WKDFSDYYSI RRGNFFMFGY
101: NARSHFNVTI FDFSAAEIEY PPAEIESDDS IDILDVVEHS SEYLSYDPVV QERKRIRQEG EEEDDIPVEH QTNVIDEEEF QGNVVSLVIS EDCEEHEQQS
201: NIVTSKRKAE RDEGIADNYQ RAKAFKSKNP FIVSFMHPSY VSRPHALYIP LKFARMYFMG NSGNLVLRVP GKGSWPVKCI MLRKDAKVTC GWKAFVLDNK
301: LKYGDVCVLE VINDTKLSLI DVTIFPGISD GTN

Best Arabidopsis Sequence Match ( AT3G18990.1 )
(BLAST)

001: MPRPFFHKLI FSSTIQEKRL RVPDKFVSKF KDELSVAVAL TVPDGHVWRV GLRKADNKIW FQDGWQEFVD RYSIRIGYLL IFRYEGNSAF SVYIFNLSHS
101: EINYHSTGLM DSAHNHFKRA RLFEDLEDED AEVIFPSSVY PSPLPESTVP ANKGYASSAI QTLFTGPVKA EEPTPTPKIP KKRGRKKKNA DPEEINSSAP
201: RDDDPENRSK FYESASARKR TVTAEERERA INAAKTFEPT NPFFRVVLRP SYLYRGCIMY LPSGFAEKYL SGISGFIKVQ LAEKQWPVRC LYKAGRAKFS
301: QGWYEFTLEN NLGEGDVCVF ELLRTRDFVL KVTAFRVNEY V

Arabidopsis Description

VRN1AP2/B3-like transcriptional factor family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQ83]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.