Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH46518 | Soybean | nucleus | 53.91 | 48.42 |
| KRG94732 | Soybean | nucleus | 35.55 | 36.4 |
| Solyc01g034190.1.1 | Tomato | cytoskeleton, cytosol, nucleus | 13.67 | 36.08 |
| KRG90691 | Soybean | nucleus | 34.38 | 32.96 |
| KRH54937 | Soybean | nucleus | 33.59 | 28.1 |
| KRG90690 | Soybean | cytosol, mitochondrion, nucleus | 32.42 | 27.85 |
| KRG99575 | Soybean | nucleus | 34.77 | 25.87 |
| KRH06798 | Soybean | cytosol | 35.94 | 25.34 |
| Solyc04g015500.2.1 | Tomato | cytosol | 20.7 | 24.42 |
| Solyc02g065350.2.1 | Tomato | mitochondrion | 30.86 | 23.87 |
| KRH18416 | Soybean | nucleus | 28.52 | 23.86 |
| PGSC0003DMT400070034 | Potato | cytoskeleton, cytosol, nucleus | 21.09 | 23.68 |
| PGSC0003DMT400096938 | Potato | nucleus | 16.8 | 23.37 |
| KRH38154 | Soybean | nucleus | 32.42 | 23.06 |
| KRH49477 | Soybean | nucleus | 28.91 | 22.98 |
| Solyc03g042510.1.1 | Tomato | nucleus | 17.19 | 22.8 |
| Solyc03g042500.1.1 | Tomato | mitochondrion | 17.97 | 22.66 |
| PGSC0003DMT400007199 | Potato | nucleus | 28.12 | 21.62 |
| KRH36061 | Soybean | golgi, nucleus | 31.25 | 20.67 |
| PGSC0003DMT400043852 | Potato | nucleus | 28.12 | 19.94 |
| Solyc03g043570.1.1 | Tomato | cytosol | 10.16 | 19.55 |
| Solyc01g015210.1.1 | Tomato | nucleus | 21.09 | 19.01 |
| PGSC0003DMT400007200 | Potato | cytosol | 23.83 | 18.6 |
| KRH36062 | Soybean | nucleus | 26.56 | 18.53 |
| Solyc03g043580.1.1 | Tomato | cytosol | 23.05 | 18.27 |
| Solyc03g044110.1.1 | Tomato | nucleus | 22.66 | 17.96 |
| KRH29559 | Soybean | nucleus | 29.3 | 17.4 |
| KRH24554 | Soybean | nucleus | 28.91 | 16.78 |
| KRG89212 | Soybean | nucleus | 28.12 | 16.55 |
| KRG90686 | Soybean | nucleus | 27.73 | 16.51 |
| KRG90688 | Soybean | nucleus | 8.2 | 16.41 |
| KRH38192 | Soybean | endoplasmic reticulum, golgi | 33.2 | 16.1 |
| PGSC0003DMT400091092 | Potato | nucleus | 18.75 | 16.05 |
| KRH49567 | Soybean | mitochondrion, nucleus | 28.52 | 15.6 |
| Solyc11g045450.1.1 | Tomato | cytosol | 17.97 | 15.49 |
| KRG90687 | Soybean | nucleus | 26.95 | 15.2 |
| KRH36063 | Soybean | nucleus | 18.36 | 14.87 |
| Solyc08g029090.2.1 | Tomato | nucleus | 32.03 | 14.04 |
| PGSC0003DMT400085817 | Potato | nucleus | 26.95 | 13.24 |
| VIT_07s0255g00070.t01 | Wine grape | nucleus | 16.02 | 11.71 |
| PGSC0003DMT400037688 | Potato | nucleus | 31.25 | 10.74 |
| Solyc02g021260.1.1 | Tomato | nucleus, plasma membrane | 20.31 | 3.95 |
Protein Annotations
| Gene3D:2.40.330.10 | MapMan:35.1 | UniProt:A0A0R0J2V0 | EMBL:ACUP02005347 | InterPro:B3_DNA-bd | InterPro:DNA-bd_pseudobarrel_sf |
| EnsemblPlantsGene:GLYMA_08G339100 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003340 | InterPro:IPR015300 |
| EnsemblPlants:KRH46517 | ProteinID:KRH46517 | ProteinID:KRH46517.1 | PFAM:PF02362 | PFscan:PS50863 | PANTHER:PTHR31920 |
| PANTHER:PTHR31920:SF26 | SMART:SM01019 | SUPFAM:SSF101936 | UniParc:UPI0006ED8AD8 | : | : |
Description
hypothetical protein
Coordinates
chr8:-:45551949..45553776
Molecular Weight (calculated)
29318.0 Da
IEP (calculated)
9.345
GRAVY (calculated)
-0.498
Length
256 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSQLDDGDG SYGYSATKPI HFFRIMLHEN LLQGNLRLPE KFVRKYGNHL SNSMLLKLPN GIEWKVNLEK RDGSVWFQEG WKDFAEYYSL ANGHLLGFRY
101: DGTSHFHVFI CDMSTMEIEY PVNKANHKRP SINSEESKGN MEGSSISNCG NHEAAGNTSF TVIMKSSYVS KRIMYLPKSP LKRYTKSGEQ YVKLLVGDRS
201: WRVKVTYCRN KTLSYFTGDW LVFAKENDLK EGDACLFQLL SNGDGIVMKV SISRRV
101: DGTSHFHVFI CDMSTMEIEY PVNKANHKRP SINSEESKGN MEGSSISNCG NHEAAGNTSF TVIMKSSYVS KRIMYLPKSP LKRYTKSGEQ YVKLLVGDRS
201: WRVKVTYCRN KTLSYFTGDW LVFAKENDLK EGDACLFQLL SNGDGIVMKV SISRRV
001: MRNMHTNRRS PGPITSAATQ RRLKPEPEPT VKKFIKIILL SRIIEKMMKV PARFVRFGPK LTDNVTLQTP VGFKRSIRIK RIGDEVWFEK GWSEFAEAHS
101: LSDGHFLFFH YEGDSCFRVV IFDVSASEIE YPLDDTDDNR EEVMDDDEQG FTGFESSDDD GEVVDMDELL KKKKKKPRVN IKSENVIILD
101: LSDGHFLFFH YEGDSCFRVV IFDVSASEIE YPLDDTDDNR EEVMDDDEQG FTGFESSDDD GEVVDMDELL KKKKKKPRVN IKSENVIILD
Arabidopsis Description
B3 domain-containing protein At1g49475 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIB4]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.