Factsheet for TraesCS2A01G435100.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 4
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G435200.1	Wheat	nucleus, plastid	94.27	92.58
TraesCS2B01G458400.1	Wheat	nucleus, plastid	91.93	91.21
Os04t0600900-02	Rice	plastid	72.14	72.14
TraesCS6A01G269600.1	Wheat	nucleus	59.38	55.88
Zm00001d017742_P001	Maize	plastid	57.03	53.68
OQU85555	Sorghum	plastid	58.85	51.72
TraesCS4A01G434900.1	Wheat	nucleus	36.46	37.74
TraesCS7A01G049100.1	Wheat	nucleus	35.94	37.3
TraesCS6A01G257600.1	Wheat	nucleus	18.49	33.49
TraesCS7A01G165600.1	Wheat	nucleus	26.82	33.33
TraesCS2A01G398300.2	Wheat	nucleus	17.97	30.67
TraesCS6A01G335900.1	Wheat	nucleus	31.77	29.83
TraesCS4A01G291500.1	Wheat	nucleus	21.35	20.1
TraesCS2A01G238700.1	Wheat	nucleus	15.62	18.81
TraesCS6A01G174800.1	Wheat	cytosol, mitochondrion, nucleus	14.84	18.1
TraesCS4A01G255000.1	Wheat	nucleus	25.78	16.31

Protein Annotations

MapMan:15.5.52.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0032502	InterPro:GRF
InterPro:Gln-Leu-Gln_QLQ	InterPro:IPR014977	InterPro:IPR014978	PFAM:PF08879	PFAM:PF08880	PFscan:PS51666
PFscan:PS51667	PANTHER:PTHR31602	PANTHER:PTHR31602:SF21	SMART:SM00951	EnsemblPlantsGene:TraesCS2A01G435100	EnsemblPlants:TraesCS2A01G435100.1
InterPro:WRC_dom	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr2A:+:687048699..687052358

Molecular Weight (calculated)

42329.0 Da

IEP (calculated)

7.269

GRAVY (calculated)

-0.623

Length

384 amino acids

Sequence
(BLAST)

001: MAMPFASLSP AADHHRSSPI FPFCRSSPLY SAGEEAAQQQ QQQQHAMSGA RWAAARPATF TAAQYEELEQ QALIYKYLVA GVPVPPDLLL PIRRGFDSLA
101: SRFYHHHALG YGSYFGKKLD PEPGRCRRTD GKKWRCSKEA AQDSKYCERH MHRGRNRSRK PVETQLVSHS QQLQQQAPAA AFHGHSPYPA IATGAGAPGS
201: FALGSTAQLH MDNAAAPYAT AGAAGNKDFR YSAYGFRTSA MEDHNQFISA AMDTAMDNYS WRLLPAQNSS FSLSSYPMLS TLSDLDQSAI CSLAKTEREP
301: LSFFGVGGGF DDDESAVKQE NQTLRPFFDE WPKDRDSWPE LQDHDSNHNN EAFSATKLSI SIPVTSSDFS TTAGSRSPHG IYSR

Best Arabidopsis Sequence Match ( AT2G36400.1 )
(BLAST)

001: MDLQLKQWRS QQQQQHQTES EEQPSAAKIP KHVFDQIHSH TATSTALPLF TPEPTSSKLS SLSPDSSSRF PKMGSFFSWA QWQELELQAL IYRYMLAGAA
101: VPQELLLPIK KSLLHLSPSY FLHHPLQHLP HYQPAWYLGR AAMDPEPGRC RRTDGKKWRC SRDVFAGHKY CERHMHRGRN RSRKPVETPT TVNATATSMA
201: SSVAAAATTT TATTTSTFAF GGGGGSEEVV GQGGSFFFSG SSNSSSELLH LSQSCSEMKQ ESNNMNNKRP YESHIGFSNN RSDGGHILRP FFDDWPRSSL
301: QEADNSSSPM SSATCLSISM PGNSSSDVSL KLSTGNEEGA RSNNNGRDQQ NMSWWSGGGS NHHHHNMGGP LAEALRSSSS SSPTSVLHQL GVSTQAFH

Arabidopsis Description

GRF3Growth-regulating factor 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJR5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.