Factsheet for TraesCS4A01G434900.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 2
mitochondrion 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plasma membrane
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G044200.1	Wheat	nucleus	96.77	97.55
TraesCS7A01G049100.1	Wheat	nucleus	96.5	96.76
HORVU7Hr1G008680.11	Barley	cytosol, mitochondrion, nucleus, vacuole	92.18	85.71
EER89089	Sorghum	cytosol, mitochondrion, nucleus	66.58	77.43
Zm00001d045533_P001	Maize	nucleus	73.58	74.59
Zm00001d035965_P004	Maize	nucleus	71.43	69.55
TraesCS2A01G435100.1	Wheat	nucleus	37.74	36.46
TraesCS7A01G165600.1	Wheat	nucleus	28.3	33.98
TraesCS6A01G269600.1	Wheat	nucleus	37.2	33.82
TraesCS6A01G257600.1	Wheat	nucleus	17.79	31.13
TraesCS2A01G398300.2	Wheat	nucleus	17.79	29.33
TraesCS6A01G335900.1	Wheat	nucleus	31.54	28.61
TraesCS4A01G291500.1	Wheat	nucleus	23.18	21.08
TraesCS6A01G174800.1	Wheat	cytosol, mitochondrion, nucleus	16.71	19.68
TraesCS2A01G238700.1	Wheat	nucleus	15.36	17.87
TraesCS4A01G255000.1	Wheat	nucleus	27.22	16.64

Protein Annotations

MapMan:15.5.52.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0032502	InterPro:GRF
InterPro:Gln-Leu-Gln_QLQ	InterPro:IPR014977	InterPro:IPR014978	PFAM:PF08879	PFAM:PF08880	PFscan:PS51666
PFscan:PS51667	PANTHER:PTHR31602	PANTHER:PTHR31602:SF7	SMART:SM00951	EnsemblPlantsGene:TraesCS4A01G434900	EnsemblPlants:TraesCS4A01G434900.1
InterPro:WRC_dom	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr4A:-:705510262..705513006

Molecular Weight (calculated)

39943.6 Da

IEP (calculated)

8.456

GRAVY (calculated)

-0.726

Length

371 amino acids

Sequence
(BLAST)

001: MLSSSAAMGM GLGGYGQQQQ QQMQMQMQRG AGPVFTPAQW AELEQQALIY KYLMAGVPVP PDLLLPIRPH HPAAGAAGTT FSFASPAASP FYHHHHPSMS
101: YYAYYGKKLD PEPWRCRRTD GKKWRCSKEA HPDSKYCERH MHRGRNRSRK PVESKSASPA HQSQQPPLSA VTSAARDAEP LPSLPAGAKT HGLSLGGAGS
201: SQMHVDASSY GGKYSLGAKS DVGELSFFSG ASGNNNRGFT IDSPTDSSWH SMGSSLPPYQ LSKPRDSGLM QGGFSYSHYE PSQELGQVTI ASLSHSQEQD
301: CRSLGGGGGG GGGGGGGLMG NVKQENQPLR PFFDEWPGRR DSWSEMDDER SNGTSFSTTQ LSISIPMPRC D

Best Arabidopsis Sequence Match ( AT4G24150.3 )
(BLAST)

001: MGTRAERKED FVGGFGFGVV ENSHKDVMVL PHHHYYPSYS SPSSSSLCYC SAGVSDPMFS VSSNQAYTSS HSGMFTPAGS GSAAVTVADP FFSLSSSGEM
101: RRSMNEDAGA AFSEAQWHEL ERQRNIYKYM MASVPVPPEL LTPFPKNHQS NTNPDVTVAV ATGGSLQLGI ASSASNNTAD LEPWRCKRTD GKKWRCSRNV
201: IPDQKYCERH THKSRPRSRK HVESSHQSSH HNDIRTAKND TSQLVRTYPQ FYGQPISQIP VLSTLPSASS PYDHHRGLRW FTKEDDAIGT LNPETQEAVQ
301: LKVGSSRELK RGFDYDLNFR QKEPIVDQSF GALQGLLSLN QTPQHNQETR QFVVEGKQDE AMGSSLTLSM AGGGMEETEG TNQHQWVSHE GPSWLYSTTP
401: GGPLAEALCL GVSNNPSSST TTSSCSRSSS

Arabidopsis Description

GRF8Growth-regulating factor 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SU44]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.