Factsheet for HORVU7Hr1G008680.11

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, vacuole, nucleus, cytosol

Predictor Summary:

plastid 1
nucleus 1
mitochondrion 1
vacuole 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G044200.1	Wheat	nucleus	86.97	94.29
TraesCS7A01G049100.1	Wheat	nucleus	86.72	93.51
TraesCS4A01G434900.1	Wheat	nucleus	85.71	92.18
EER89089	Sorghum	cytosol, mitochondrion, nucleus	61.15	76.49
Zm00001d045533_P001	Maize	nucleus	67.42	73.5
Zm00001d035965_P004	Maize	nucleus	66.42	69.55
HORVU7Hr1G034610.4	Barley	mitochondrion	25.56	32.59
HORVU6Hr1G068370.1	Barley	nucleus	31.58	32.31
HORVU2Hr1G094460.2	Barley	mitochondrion, plasma membrane	16.79	29.91
HORVU0Hr1G016610.1	Barley	plastid	30.83	29.5
HORVU6Hr1G065740.4	Barley	nucleus	15.54	29.11
HORVU6Hr1G081210.1	Barley	nucleus	29.57	28.57
HORVU0Hr1G016590.2	Barley	cytosol, nucleus	15.04	28.3
HORVU2Hr1G094470.2	Barley	nucleus	16.79	26.48
HORVU0Hr1G026650.1	Barley	mitochondrion, nucleus	7.02	24.56
HORVU4Hr1G037480.5	Barley	nucleus	17.79	21.65
HORVU4Hr1G003440.12	Barley	nucleus	21.55	21.08
HORVU6Hr1G035720.1	Barley	cytosol, mitochondrion, nucleus	15.29	19.43
HORVU2Hr1G054270.3	Barley	plastid	14.54	19.33
HORVU4Hr1G010080.2	Barley	nucleus	27.57	18.06

Protein Annotations

MapMan:15.5.52.1	UniProt:A0A287VGT2	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0032502
InterPro:GRF	InterPro:Gln-Leu-Gln_QLQ	EnsemblPlantsGene:HORVU7Hr1G008680	EnsemblPlants:HORVU7Hr1G008680.11	InterPro:IPR014977	InterPro:IPR014978
PFAM:PF08879	PFAM:PF08880	PFscan:PS51666	PFscan:PS51667	PANTHER:PTHR31602	PANTHER:PTHR31602:SF7
SMART:SM00951	UniParc:UPI000B46BD3B	InterPro:WRC_dom	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr7H:+:11283559..11286565

Molecular Weight (calculated)

43249.7 Da

IEP (calculated)

9.026

GRAVY (calculated)

-0.630

Length

399 amino acids

Sequence
(BLAST)

001: MLSSSAAMGM GLGGYGGQQM QMQRGAGPVF TPAQWAELEQ QALIYKYLMA GVPVPPDLLL PIRPHPAAAA GTTFSFANPA ASPFYHHHHP SMSYYAYYGK
101: KLDPEPWRCR RTDGKKWRCS KEAHPDSKYC ERHMHRGRNR SRKPVESKSA SPAHQSQQPQ LSAVTSAARD AEPLPSLPAG ATKNHGLSLG GAGAGSSQMH
201: VDASSYGGNR YSLGANKSDV GELSFFSGAS GNNNRGFTID SPTDSSWHSM GSSLPPYQLS KPRDLQGGFS YSHFEPSQEL GQVTIASLSH SQEQDRRSFG
301: GGGGGGAGLM GNVKQENQPL RPFFDEWPGR RDSWSEMEDE RSNGTSFSTT QLSISIPMPR CESPPSASRH LDRLGQNLLN LLTVFPLLLL LQAIDRIGT

Best Arabidopsis Sequence Match ( AT3G13960.1 )
(BLAST)

001: MMSLSGSSGR TIGRPPFTPT QWEELEHQAL IYKYMVSGVP VPPELIFSIR RSLDTSLVSR LLPHQSLGWG CYQMGFGRKP DPEPGRCRRT DGKKWRCSRE
101: AYPDSKYCEK HMHRGRNRAR KSLDQNQTTT TPLTSPSLSF TNNNNPSPTL SSSSSSNSSS TTYSASSSSM DAYSNSNRFG LGGSSSNTRG YFNSHSLDYP
201: YPSTSPKQQQ QTLHHASALS LHQNTNSTSQ FNVLASATDH KDFRYFQGIG ERVGGVGERT FFPEASRSFQ DSPYHHHQQP LATVMNDPYH HCSTDHNKID
301: HHHTYSSSSS SQHLHHDHDH RQQQCFVLGA DMFNKPTRSV LANSSRQDQN QEEDEKDSSE SSKKSLHHFF GEDWAQNKNS SDSWLDLSSH SRLDTGS

Arabidopsis Description

GRF5Growth-regulating factor 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8A6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.