Factsheet for HORVU6Hr1G035720.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

nucleus 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	nucleus
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G163900.1	Wheat	plastid	70.7	89.88
TraesCS6B01G204300.1	Wheat	plastid	67.83	88.02
TraesCS6A01G174800.1	Wheat	cytosol, mitochondrion, nucleus	86.94	86.67
HORVU2Hr1G094460.2	Barley	mitochondrion, plasma membrane	14.65	20.54
HORVU6Hr1G065740.4	Barley	nucleus	13.69	20.19
HORVU2Hr1G094470.2	Barley	nucleus	14.97	18.58
HORVU4Hr1G037480.5	Barley	nucleus	18.79	17.99
HORVU2Hr1G054270.3	Barley	plastid	15.92	16.67
HORVU7Hr1G034610.4	Barley	mitochondrion	16.56	16.61
HORVU7Hr1G008680.11	Barley	cytosol, mitochondrion, nucleus, vacuole	19.43	15.29
HORVU6Hr1G081210.1	Barley	nucleus	19.43	14.77
HORVU6Hr1G068370.1	Barley	nucleus	18.15	14.62
HORVU4Hr1G003440.12	Barley	nucleus	18.47	14.22
HORVU0Hr1G016590.2	Barley	cytosol, nucleus	8.92	13.21
HORVU0Hr1G016610.1	Barley	plastid	17.2	12.95
HORVU4Hr1G010080.2	Barley	nucleus	22.93	11.82
HORVU0Hr1G026650.1	Barley	mitochondrion, nucleus	2.55	7.02

Protein Annotations

MapMan:15.5.52.1	UniProt:A0A287TX00	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0032502
InterPro:GRF	InterPro:Gln-Leu-Gln_QLQ	EnsemblPlantsGene:HORVU6Hr1G035720	EnsemblPlants:HORVU6Hr1G035720.1	InterPro:IPR014977	InterPro:IPR014978
PFAM:PF08879	PFAM:PF08880	PFscan:PS51666	PFscan:PS51667	PANTHER:PTHR31602	PANTHER:PTHR31602:SF2
SMART:SM00951	UniParc:UPI000B465E2F	InterPro:WRC_dom	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr6H:+:174063621..174064814

Molecular Weight (calculated)

34283.3 Da

IEP (calculated)

7.281

GRAVY (calculated)

-0.438

Length

314 amino acids

Sequence
(BLAST)

001: MNKLELDDRM FAGNGDVGQR PAVATLMPPV DTHVPVTSTM GTYVLLFTAA QWVELQRQSL IYNHMAASSP IPSYLLFSDI NPDAAAAAAA PTQQASSLYY
101: CCYYTPLLVH HYQAQQAASM SMLLQCMQQA VARRRCGRTD GKKWRCARDA EPDQKYCQRH LNRVGRARPP APARKQQHQH AAAAVDAHHR DRDKSAMTAP
201: AATCTSHGNK SSGNTMREDD DDYTRGFLDF TGGVCLPEQR ENRLSLNYDN IVELYCNRQV VATPTVTASA ASTTTAKDDD AIDHRAGATW VGIGGPLGEA
301: LGLAVEIQWP AGST

Best Arabidopsis Sequence Match ( AT4G37740.1 )
(BLAST)

001: MDIGVHVLGS VTSNENESLG LKELIGTKQD RSGFIGEDCL QRSLKLARTT TRAEEEENLS SSVAAAYCKT MSFHQGIPLM RSASPLSSDS RRQEQMLSFS
101: DKPDALDFSK YVGLDNSSNN KNSLSPFLHQ IPPPSYFRSS GGYGSGGMMM NMSMQGNFTG VKGPFTLTQW AELEQQALIY KYITANVPVP SSLLISIKKS
201: FYPYGSLPPS SFGWGTFHLG FAGGNMDPEP GRCRRTDGKK WRCSRDAVPD QKYCERHINR GRHRSRKPVE VQSGQNQTAA AASKAVTTPQ QPVVAGNTNR
301: SNARASSNRS LAIGSQYINP STESLPNNRG VSIYPSTVNL QPKESPVIHQ KHRNNNNPFE FGHISSDSLL NPNTAKTYGS SFLDFSSNQE KHSGNHNHNS
401: WPEELTSDWT QLSMSIPIAS SSPSSTHNNN NAQEKTTLSP LRLSRELDLS IQTDETTIEP TVKKVNTWIP ISWGNSLGGP LGEVLNSTTN SPTFGSSPTG
501: VLQKSTFCSL SNNSSVSSPI AENNRHNGDY FHYTT

Arabidopsis Description

GRF2GRF2 [Source:UniProtKB/TrEMBL;Acc:A0A178UXW8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.