Factsheet for HORVU2Hr1G094460.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:

mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plasma membrane
Any Predictor:	mitochondrion
MultiLoc:	mitochondrion
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G398300.2	Wheat	nucleus	84.38	84.0
TraesCS2D01G395900.1	Wheat	nucleus	84.82	82.97
TraesCS2B01G416300.1	Wheat	nucleus	83.48	82.38
HORVU2Hr1G094470.2	Barley	nucleus	91.52	81.03
Os04t0574500-01	Rice	cytosol, mitochondrion, nucleus, plastid	69.2	65.68
Zm00001d051456_P001	Maize	nucleus	64.29	65.16
GSMUA_Achr5P20170_001	Banana	extracellular	45.98	60.23
HORVU6Hr1G065740.4	Barley	nucleus	50.45	53.05
GSMUA_Achr8P12060_001	Banana	extracellular	47.77	52.97
GSMUA_Achr11P...	Banana	mitochondrion, plasma membrane	44.2	48.29
VIT_02s0025g04910.t01	Wine grape	nucleus	31.7	33.97
PGSC0003DMT400009997	Potato	nucleus	16.07	29.51
Solyc08g079800.2.1	Tomato	nucleus	25.0	25.69
HORVU2Hr1G054270.3	Barley	plastid	28.57	21.33
HORVU7Hr1G034610.4	Barley	mitochondrion	26.34	18.85
HORVU4Hr1G037480.5	Barley	nucleus	27.23	18.6
HORVU0Hr1G016590.2	Barley	cytosol, nucleus	16.52	17.45
HORVU7Hr1G008680.11	Barley	cytosol, mitochondrion, nucleus, vacuole	29.91	16.79
HORVU6Hr1G068370.1	Barley	nucleus	27.68	15.9
HORVU4Hr1G003440.12	Barley	nucleus	27.23	14.95
HORVU6Hr1G035720.1	Barley	cytosol, mitochondrion, nucleus	20.54	14.65
HORVU6Hr1G081210.1	Barley	nucleus	26.79	14.53
HORVU0Hr1G016610.1	Barley	plastid	26.79	14.39
HORVU0Hr1G026650.1	Barley	mitochondrion, nucleus	5.8	11.4
HORVU4Hr1G010080.2	Barley	nucleus	30.8	11.33

Protein Annotations

MapMan:15.5.52.1	UniProt:A0A287J014	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0032502
InterPro:GRF	InterPro:Gln-Leu-Gln_QLQ	EnsemblPlantsGene:HORVU2Hr1G094460	EnsemblPlants:HORVU2Hr1G094460.2	InterPro:IPR014977	InterPro:IPR014978
PFAM:PF08879	PFAM:PF08880	PFscan:PS51666	PFscan:PS51667	PANTHER:PTHR31602	PANTHER:PTHR31602:SF3
SMART:SM00951	UniParc:UPI000B4603D9	InterPro:WRC_dom	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr2H:-:664885406..664887892

Molecular Weight (calculated)

23788.5 Da

IEP (calculated)

10.431

GRAVY (calculated)

-0.260

Length

224 amino acids

Sequence
(BLAST)

001: TPSRIGVGLL HLQFRPNLEG ALLGSGVGTV TMAAPLPLAL GLGLGVGGCC SDSRRSDAEA TRPSALTFMQ RQELEHQVLI YRYFAANAPV PVHLVLPIWK
101: SLAASSSAPQ RFPSLAGLGS MCYDQRSSME PEPDRCRRTD GKKWRCSHGV VPGHKYCERH VHRGRGRSRK PVEAAAATSA TPIRAMHAAD GQGATGAHAH
201: APPQRLSFSS PAGVYLAHGT ARAT

Best Arabidopsis Sequence Match ( AT2G36400.1 )
(BLAST)

001: MDLQLKQWRS QQQQQHQTES EEQPSAAKIP KHVFDQIHSH TATSTALPLF TPEPTSSKLS SLSPDSSSRF PKMGSFFSWA QWQELELQAL IYRYMLAGAA
101: VPQELLLPIK KSLLHLSPSY FLHHPLQHLP HYQPAWYLGR AAMDPEPGRC RRTDGKKWRC SRDVFAGHKY CERHMHRGRN RSRKPVETPT TVNATATSMA
201: SSVAAAATTT TATTTSTFAF GGGGGSEEVV GQGGSFFFSG SSNSSSELLH LSQSCSEMKQ ESNNMNNKRP YESHIGFSNN RSDGGHILRP FFDDWPRSSL
301: QEADNSSSPM SSATCLSISM PGNSSSDVSL KLSTGNEEGA RSNNNGRDQQ NMSWWSGGGS NHHHHNMGGP LAEALRSSSS SSPTSVLHQL GVSTQAFH

Arabidopsis Description

GRF3Growth-regulating factor 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJR5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.